RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 BEND5Q7L4P6 421 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 TAC4Q86UU9 113 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 DEFB106AQ8N104 65 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 CAMKK1Q8N5S9 505 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 C18orf8Q96DM3 657 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 ARHGEF4Q9NR80 690 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 SEPT11Q9NVA2 429 aaKnown RBP15.82■□□□□ 0.12
PTCD1-204ENST00000430982 ASNSD1Q9NWL6 643 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 WDR35Q9P2L0 1181 aa15.82■□□□□ 0.12
PTCD1-204ENST00000430982 BCLAF3A2AJT9 711 aaKnown RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 HSF2BPO75031 334 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 TOP3BO95985 862 aaKnown RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 APODP05090 189 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 GLI1P08151 1106 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 CCDC172P0C7W6 258 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 TYRP14679 529 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 FERP16591 822 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 CSRP1P21291 193 aaKnown RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 CHKAP35790 457 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 EIF2DP41214 584 aaKnown RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 SEC13P55735 322 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 CDK17Q00537 523 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 FOXC1Q12948 553 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 FBXO43Q4G163 708 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 C2CD6Q53TS8 623 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 DCAF6Q58WW2 860 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 NUGGCQ68CJ6 796 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 TRIM72Q6ZMU5 477 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 UNC45BQ8IWX7 931 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 RNF214Q8ND24 703 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 BAP1Q92560 729 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 EZH1Q92800 747 aaPredicted RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 XPO6Q96QU8 1125 aaKnown RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 FAM204AQ9H8W3 233 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 DNAJC17Q9NVM6 304 aaKnown RBP15.81■□□□□ 0.12
PTCD1-204ENST00000430982 PLK2Q9NYY3 685 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 MARK1Q9P0L2 795 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 IFNKQ9P0W0 207 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 DEC1Q9P2X7 70 aa15.81■□□□□ 0.12
PTCD1-204ENST00000430982 FREM2Q5SZK8 3169 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 SYNJ2BP-COX16A0A087WUM0 186 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 C4orf47A7E2U8 309 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 GOLGA8SH3BPF8 625 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 TSPAN3O60637 253 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 ATG13O75143 517 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 TULP3O75386 442 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 DAB1O75553 588 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 KAT7O95251 611 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 TRUB2O95900 331 aaKnown RBP15.8■□□□□ 0.12
PTCD1-204ENST00000430982 CYP1A1P04798 512 aaPredicted RBP15.8■□□□□ 0.12
PTCD1-204ENST00000430982 CYBBP04839 570 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 CEACAM1P13688 526 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 SPINK2P20155 84 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 GRIA2P42262 883 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 RNASE9P60153 205 aaKnown RBP15.8■□□□□ 0.12
PTCD1-204ENST00000430982 PITX1P78337 314 aaPredicted RBP15.8■□□□□ 0.12
PTCD1-204ENST00000430982 RING1Q06587 406 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 FAM102AQ5T9C2 384 aaPredicted RBP15.8■□□□□ 0.12
PTCD1-204ENST00000430982 SH3PXD2AQ5TCZ1 1133 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 GRAMD4Q6IC98 578 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 MMS22LQ6ZRQ5 1243 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 SLC26A9Q7LBE3 791 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 ZDHHC17Q8IUH5 632 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 ETFBKMTQ8IXQ9 262 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 FCRL2Q96LA5 508 aaPredicted RBP15.8■□□□□ 0.12
PTCD1-204ENST00000430982 SLC2A13Q96QE2 648 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 PCDHB18PQ96TA0 734 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 COX16Q9P0S2 106 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 MYO6Q9UM54 1294 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 TLR6Q9Y2C9 796 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 LAMA5O15230 3695 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 KIAA1549LQ6ZVL6 1849 aa15.8■□□□□ 0.12
PTCD1-204ENST00000430982 SMG1Q96Q15 3661 aaKnown RBP15.79■□□□□ 0.12
PTCD1-204ENST00000430982 NUP205Q92621 2012 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 TBC1D3BA6NDS4 549 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 LRRC53A6NM62 1247 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 TRIM24O15164 1050 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 CACNG3O60359 315 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 LATS1O95835 1130 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 MOCS2O96007 188 aaPredicted RBP15.79■□□□□ 0.12
PTCD1-204ENST00000430982 IGLV3-27P01718 113 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 GABRB2P47870 512 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 SLC11A2P49281 568 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 MESP2Q0VG99 397 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 NNTQ13423 1086 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 ASIC2Q16515 512 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 PREPLQ4J6C6 727 aaPredicted RBP15.79■□□□□ 0.12
PTCD1-204ENST00000430982 XYLT1Q86Y38 959 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 SFTPA1Q8IWL2 248 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 CPXM2Q8N436 756 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
PTCD1-204ENST00000430982 RPLP0P6Q8NHW5 317 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 CCDC26Q8TAB7 109 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 SLC30A5Q8TAD4 765 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 DDI1Q8WTU0 396 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 AGPAT1Q99943 283 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 C11orf70Q9BRQ4 267 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 SCNM1Q9BWG6 230 aa15.79■□□□□ 0.12
PTCD1-204ENST00000430982 DDIT4Q9NX09 232 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms