RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 DDIT4Q9NX09 232 aa10.19□□□□□ -0.78
HDAC6-207ENST00000430858 ELOVL2Q9NXB9 296 aa10.19□□□□□ -0.78
HDAC6-207ENST00000430858 RRN3Q9NYV6 651 aa10.19□□□□□ -0.78
HDAC6-207ENST00000430858 BCCIPQ9P287 314 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC6-207ENST00000430858 THAP10Q9P2Z0 257 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-207ENST00000430858 NOCTQ9UK39 431 aaKnown RBP10.19□□□□□ -0.78
HDAC6-207ENST00000430858 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
HDAC6-207ENST00000430858 KIAA1549LQ6ZVL6 1849 aa10.19□□□□□ -0.78
HDAC6-207ENST00000430858 PTPRZ1P23471 2315 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 ZFHX2Q9C0A1 2572 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 A0A1W2PQF6 199 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 TBL1XO60907 577 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 LRP3O75074 770 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 GRAP2O75791 330 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 RHOBTB1O94844 696 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 MOCS2O96007 188 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 CYP1A1P04798 512 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 PABPC1P11940 636 aaKnown RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 ABCB4P21439 1286 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 HLA-FP30511 346 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 MATKP42679 507 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 WASP42768 502 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 SGSHP51688 502 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 NOMO3P69849 1222 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 PITX1P78337 314 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 ARID5AQ03989 594 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 ENPP2Q13822 863 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 BYSLQ13895 437 aaKnown RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 ELF2Q15723 593 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 ZC3H12AQ5D1E8 599 aaKnown RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 MS4A13Q5J8X5 152 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 NAA35Q5VZE5 725 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 TRIM72Q6ZMU5 477 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 KBTBD6Q86V97 674 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 MFN1Q8IWA4 741 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 CCDC117Q8IWD4 279 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 KIAA2013Q8IYS2 634 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 AHI1Q8N157 1196 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 PGBD3Q8N328 593 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 HJURPQ8NCD3 748 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 OLIG1Q8TAK6 271 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 HMGB4Q8WW32 186 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 RNF34Q969K3 372 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 SPACA7Q96KW9 195 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 TPSD1Q9BZJ3 242 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 CIPCQ9C0C6 399 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 CACNA2D2Q9NY47 1150 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDAC6-207ENST00000430858 GGA2Q9UJY4 613 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 STAP1Q9ULZ2 295 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 STON1Q9Y6Q2 735 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
HDAC6-207ENST00000430858 FAM186AA6NE01 2351 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 DMDP11532 3685 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 SYCE3A1L190 88 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 KCNU1A8MYU2 1149 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 F5H5T6 163 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 M0QYT0 321 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 CAVIN2O95810 425 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 F9P00740 461 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 CCDC172P0C7W6 258 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 GABRG2P18507 467 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 P2RY2P41231 377 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 IL12RB1P42701 662 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 RPS24P62847 133 aaKnown RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 TPM4P67936 248 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 FMO1Q01740 532 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 STARD3Q14849 445 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 IQCB1Q15051 598 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 SKOR2Q2VWA4 1001 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 PLK5Q496M5 336 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 FAM102AQ5T9C2 384 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 TMEM215Q68D42 235 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 CHST9Q7L1S5 443 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 ARCQ7LC44 396 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 KIAA0907Q7Z7F0 614 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 CHSY1Q86X52 802 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 XYLT1Q86Y38 959 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 FIBINQ8TAL6 211 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 SLC20A1Q8WUM9 679 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 CPA5Q8WXQ8 436 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 PGAP3Q96FM1 320 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 DUSP15Q9H1R2 295 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 CD248Q9HCU0 757 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 ABCB8Q9NUT2 735 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 STIM2Q9P246 746 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 XPO7Q9UIA9 1087 aaKnown RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 PLA2G4CQ9UP65 541 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 PCDHGA5Q9Y5G8 931 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 RIF1Q5UIP0 2472 aaKnown RBP10.17□□□□□ -0.78
HDAC6-207ENST00000430858 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 GPR179Q6PRD1 2367 aa10.17□□□□□ -0.78
HDAC6-207ENST00000430858 OTOGLQ3ZCN5 2332 aa10.16□□□□□ -0.78
HDAC6-207ENST00000430858 SYNJ2BP-COX16A0A087WUM0 186 aa10.16□□□□□ -0.78
HDAC6-207ENST00000430858 A0A1W2PQC6 194 aa10.16□□□□□ -0.78
HDAC6-207ENST00000430858 WASH3PC4AMC7 463 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms