RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 AUTS2Q8WXX7 1259 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 SUSD6Q92537 303 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 TOX2Q96NM4 488 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 BRD8Q9H0E9 1235 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 NT5MQ9NPB1 228 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCH1-207ENST00000429896 A0A0G2JND7 137 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 ANKRD65E5RJM6 399 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 EPHB6O15197 1021 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 SOX11P35716 441 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
PTCH1-207ENST00000429896 MEA1Q16626 185 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 RFWD2Q8NHY2 731 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 CEP19Q96LK0 163 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 DUSP10Q9Y6W6 482 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 CYP1A2P05177 515 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 GLI1P08151 1106 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 ITIH2P19823 946 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 PMS2P54278 862 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 RAB42Q8N4Z0 105 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 PPM1NQ8N819 430 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 LNX1Q8TBB1 728 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-207ENST00000429896 OR12D3Q9UGF7 316 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 NCKAP1Q9Y2A7 1128 aa13.29□□□□□ -0.28
PTCH1-207ENST00000429896 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 PRPF4O43172 522 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ASPAP45381 313 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 MOGSQ13724 837 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 MARC1Q5VT66 337 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 CASP10Q92851 521 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 CFAP99D6REC4 459 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 HSPA4LO95757 839 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 IGSF6O95976 241 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 COILP38432 576 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 GJA8P48165 433 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 IMPG1Q17R60 797 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ADAM33Q9BZ11 813 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 O00370 1275 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 TRIM42Q8IWZ5 723 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 CCDC78A2IDD5 438 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 C2orf81A6NN90 581 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ERBB2P04626 1255 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 SERPIND1P05546 499 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 MATKP42679 507 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 SLC4A11Q8NBS3 891 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 FUBP3Q96I24 572 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 PRDM16Q9HAZ2 1276 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 STX7O15400 261 aaKnown RBP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 AMPD1P23109 780 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 LMO2P25791 158 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ATP6V1E1P36543 226 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 SCNN1BP51168 640 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-207ENST00000429896 TRIM51Q9BSJ1 452 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 BBS2Q9BXC9 721 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 NAALADL1Q9UQQ1 740 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ASB3Q9Y575 518 aa13.28□□□□□ -0.28
PTCH1-207ENST00000429896 ESYT3A0FGR9 886 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 MBLAC1A4D2B0 266 aaPredicted RBP13.27□□□□□ -0.28
PTCH1-207ENST00000429896 TTI1O43156 1089 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 VNN1O95497 513 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 SOD2P04179 222 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 ADCY2Q08462 1091 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.28
PTCH1-207ENST00000429896 SOWAHAQ2M3V2 549 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 ERAP2Q6P179 960 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 FAM47DPA6NHR8 397 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 JCHAINP01591 159 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 ING5Q8WYH8 240 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 BAP1Q92560 729 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 ADGRE3Q9BY15 652 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.28
PTCH1-207ENST00000429896 AGO3Q9H9G7 860 aaKnown RBP13.27□□□□□ -0.28
PTCH1-207ENST00000429896 MYBPHLA2RUH7 354 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 PFDN1O60925 122 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 NDUFS3O75489 264 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 SYF2O95926 243 aaKnown RBP13.27□□□□□ -0.29
PTCH1-207ENST00000429896 NNTQ13423 1086 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 POF1BQ8WVV4 589 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 SH3KBP1Q96B97 665 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 VPS11Q9H270 941 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
PTCH1-207ENST00000429896 ZFATQ9P243 1243 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-207ENST00000429896 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 NRIP1P48552 1158 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 IGSF21Q96ID5 467 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 C2orf49Q9BVC5 232 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-207ENST00000429896 TRIM54Q9BYV2 358 aa13.27□□□□□ -0.29
PTCH1-207ENST00000429896 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms