RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SFMBT1Q9UHJ3 866 aa15.53■□□□□ 0.08
MSH5-208ENST00000429846 PLA2G4CQ9UP65 541 aa15.53■□□□□ 0.08
MSH5-208ENST00000429846 ZFHX4Q86UP3 3567 aa15.53■□□□□ 0.08
MSH5-208ENST00000429846 TRIM49BA6NDI0 452 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 P4HA2O15460 535 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 IRAK2O43187 625 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 CER1O95813 267 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 ZNF883P0CG24 379 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 MAOBP27338 520 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 ZBTB16Q05516 673 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 RING1Q06587 406 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 IL27RAQ6UWB1 636 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 KIAA0907Q7Z7F0 614 aaPredicted RBP15.52■□□□□ 0.08
MSH5-208ENST00000429846 NAXDQ8IW45 347 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 UNC45BQ8IWX7 931 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 ZCCHC9Q8N567 271 aaKnown RBP15.52■□□□□ 0.08
MSH5-208ENST00000429846 UBA3Q8TBC4 463 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 SLC35F5Q8WV83 523 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 SORCS1Q8WY21 1168 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 NDRG1Q92597 394 aaKnown RBP15.52■□□□□ 0.08
MSH5-208ENST00000429846 GOLGA1Q92805 767 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 DHTKD1Q96HY7 919 aaPredicted RBP15.52■□□□□ 0.08
MSH5-208ENST00000429846 TMEM245Q9H330 911 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 GGA2Q9UJY4 613 aa15.52■□□□□ 0.08
MSH5-208ENST00000429846 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.52■□□□□ 0.08
MSH5-208ENST00000429846 FAM221BA6H8Z2 402 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 BCAT2O15382 392 aaPredicted RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 MSI1O43347 362 aaKnown RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 FBXO21O94952 628 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 IGLV3-27P01718 113 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 LTFP02788 710 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 ATP5BP06576 529 aaKnown RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 PABPC1P11940 636 aaKnown RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 SLC11A2P49281 568 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 LRMPQ12912 555 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 TRIP6Q15654 476 aaKnown RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 CNGA2Q16280 664 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 FNDC3BQ53EP0 1204 aaKnown RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 FOXR2Q6PJQ5 311 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 CHST9Q7L1S5 443 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 ELOA2Q8IYF1 753 aaPredicted RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 PPM1KQ8N3J5 372 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 ZCCHC14Q8WYQ9 949 aaKnown RBP15.51■□□□□ 0.07
MSH5-208ENST00000429846 HSFY1Q96LI6 401 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 MIR1-1HGQ9H1L0 117 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 LHX5Q9H2C1 402 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 ABCB8Q9NUT2 735 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 PCDHB9Q9Y5E1 797 aa15.51■□□□□ 0.07
MSH5-208ENST00000429846 CFAP47Q6ZTR5 3102 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 TYW5A2RUC4 315 aaKnown RBP15.5■□□□□ 0.07
MSH5-208ENST00000429846 M0QYV0 167 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 SH3BP5O60239 455 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 TSPAN3O60637 253 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 DLDP09622 509 aaKnown RBP15.5■□□□□ 0.07
MSH5-208ENST00000429846 LCP1P13796 627 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 FAM193AP78312 1265 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 GCNT1Q02742 428 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 NNTQ13423 1086 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 CCDC40Q4G0X9 1142 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 PMF1Q6P1K2 205 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 RAB44Q7Z6P3 723 aaPredicted RBP15.5■□□□□ 0.07
MSH5-208ENST00000429846 ADIPOR2Q86V24 386 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 CACUL1Q86Y37 369 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 TFAP2BQ92481 460 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 AZIN2Q96A70 460 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 KLK13Q9UKR3 277 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
MSH5-208ENST00000429846 SART1O43290 800 aaKnown RBP15.49■□□□□ 0.07
MSH5-208ENST00000429846 HLA-EP13747 358 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 MATKP42679 507 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 NUCB2P80303 420 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 PTPRNQ16849 979 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 TTC31Q49AM3 519 aaPredicted RBP15.49■□□□□ 0.07
MSH5-208ENST00000429846 PIK3R6Q5UE93 754 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 MBLAC2Q68D91 279 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 GLRX5Q86SX6 157 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 ADAMTS14Q8WXS8 1223 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 ERCC4Q92889 916 aaPredicted RBP15.49■□□□□ 0.07
MSH5-208ENST00000429846 SERPINB11Q96P15 392 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 DDX50Q9BQ39 737 aaKnown RBP15.49■□□□□ 0.07
MSH5-208ENST00000429846 OSGEPQ9NPF4 335 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 EIF2B4Q9UI10 523 aaKnown RBP15.49■□□□□ 0.07
MSH5-208ENST00000429846 NUMA1Q14980 2115 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 AKAP13Q12802 2813 aa15.49■□□□□ 0.07
MSH5-208ENST00000429846 BICDL2A1A5D9 508 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 ACSL4O60488 711 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 TBL1XO60907 577 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 DNTTP04053 509 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 FTH1P19P0C7X4 201 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 POLR2EP19388 210 aaKnown RBP15.48■□□□□ 0.07
MSH5-208ENST00000429846 RGS7P49802 495 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 SGSHP51688 502 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 AFF3P51826 1226 aaKnown RBP15.48■□□□□ 0.07
MSH5-208ENST00000429846 TBX4P57082 545 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 MEA1Q16626 185 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 FAM133BQ5BKY9 247 aaKnown RBP15.48■□□□□ 0.07
MSH5-208ENST00000429846 FAM124AQ86V42 546 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 MFN1Q8IWA4 741 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 CHCHD4Q8N4Q1 142 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 HJURPQ8NCD3 748 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms