RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ST3GAL5Q9UNP4 418 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 CHKBQ9Y259 395 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 THSD7BQ9C0I4 1608 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 DOCK3Q8IZD9 2030 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SYNJ2BP-COX16A0A087WUM0 186 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SDR42E2A6NKP2 422 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 CXorf49A8MYA2 514 aaPredicted RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 CA12O43570 354 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 HNRNPCL1O60812 293 aaKnown RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 TGDSO95455 350 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SERPINB4P48594 390 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 DAOAP59103 153 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 KCNJ2P63252 427 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 PARP6Q2NL67 630 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 NBPF20Q3BBV1 942 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ARL13BQ3SXY8 428 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SWT1Q5T5J6 900 aaKnown RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 NLRP9Q7RTR0 991 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 CCDC91Q7Z6B0 441 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ANKLE1Q8NAG6 615 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 NDRG1Q92597 394 aaKnown RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 P2RY11Q96G91 374 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SMARCD1Q96GM5 515 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ZIC5Q96T25 663 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 GAD1Q99259 594 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 LGMNQ99538 433 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 MAGEB5Q9BZ81 275 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ULBP1Q9BZM6 244 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 PLAC1Q9HBJ0 212 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SPC25Q9HBM1 224 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ZFYVE28Q9HCC9 887 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 CRTAC1Q9NQ79 661 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 COX16Q9P0S2 106 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 MFHAS1Q9Y4C4 1052 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 TSC2P49815 1807 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 GPR182O15218 404 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 NCAM2O15394 837 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 F9P00740 461 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 CSH1P0DML2 217 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 CSH2P0DML3 217 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 PGAM1P18669 254 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 HCAR3P49019 387 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 NDUFV1P49821 464 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 IFRD2Q12894 506 aaPredicted RBP14.1□□□□□ -0.15
THBS3-202ENST00000428962 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 MPP5Q8N3R9 675 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 CCDC33Q8N5R6 958 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 CCNYQ8ND76 341 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 RAB3IL1Q8TBN0 382 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 INPP5DQ92835 1189 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 PGAP3Q96FM1 320 aaPredicted RBP14.1□□□□□ -0.15
THBS3-202ENST00000428962 SENP6Q9GZR1 1112 aaPredicted RBP14.1□□□□□ -0.15
THBS3-202ENST00000428962 BRD8Q9H0E9 1235 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 LRMDAQ9H2I8 198 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 NOD2Q9HC29 1040 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 PIGVQ9NUD9 493 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 BAIAP2L1Q9UHR4 511 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 ZFP69BQ9UJL9 534 aa14.1□□□□□ -0.15
THBS3-202ENST00000428962 I3L4J1 428 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 HGSO14964 777 aaPredicted RBP14.09□□□□□ -0.15
THBS3-202ENST00000428962 DCLK1O15075 740 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 MTSS1O43312 755 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 ALDH1A2O94788 518 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 HSPA8P11142 646 aaKnown RBP14.09□□□□□ -0.15
THBS3-202ENST00000428962 ODC1P11926 461 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 PAX3P23760 479 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 ADRA1BP35368 520 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 RAB27AP51159 221 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 CLCNKBP51801 687 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 LBX1P52954 281 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 INHBEP58166 350 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 TPI1P60174 286 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 PITX1P78337 314 aaPredicted RBP14.09□□□□□ -0.15
THBS3-202ENST00000428962 RAB41Q5JT25 222 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 KIAA0319Q5VV43 1072 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 SYPL2Q5VXT5 272 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 ATG16L1Q676U5 607 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 CASC4Q6P4E1 433 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 MARK2Q7KZI7 788 aaKnown RBP14.09□□□□□ -0.15
THBS3-202ENST00000428962 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
THBS3-202ENST00000428962 GSTCDQ8NEC7 633 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 PCED1BQ96HM7 432 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 SMOQ99835 787 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 TRIM62Q9BVG3 475 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 SMYD2Q9NRG4 433 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 MOCS1Q9NZB8 636 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 IGSF9Q9P2J2 1179 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 PLLPQ9Y342 182 aa14.09□□□□□ -0.15
THBS3-202ENST00000428962 ARL5CA6NH57 179 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 RFPL1O75677 317 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 LTFP02788 710 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 NCAM1P13591 858 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 DBN1Q16643 649 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 INTS6LQ5JSJ4 861 aaKnown RBP14.08□□□□□ -0.15
THBS3-202ENST00000428962 MFSD14CQ5VZR4 134 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 ZNF449Q6P9G9 518 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 TRMT10BQ6PF06 316 aaKnown RBP14.08□□□□□ -0.15
THBS3-202ENST00000428962 TIFABQ6ZNK6 161 aa14.08□□□□□ -0.15
THBS3-202ENST00000428962 HFE2Q6ZVN8 426 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms