RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ZNF292O60281 2723 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 APBB3O95704 486 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 MOCS2O96007 188 aaPredicted RBP17.32■□□□□ 0.36
VRK2-204ENST00000428021 FERP16591 822 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 TFE3P19532 575 aaPredicted RBP17.32■□□□□ 0.36
VRK2-204ENST00000428021 PBX1P40424 430 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 RNASE9P60153 205 aaKnown RBP17.32■□□□□ 0.36
VRK2-204ENST00000428021 PTP4A2Q12974 167 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 NFKBIBQ15653 356 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 CLEC16AQ2KHT3 1053 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 MPP7Q5T2T1 576 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 FAM102AQ5T9C2 384 aaPredicted RBP17.32■□□□□ 0.36
VRK2-204ENST00000428021 TRNP1Q6NT89 227 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 MMS22LQ6ZRQ5 1243 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 AGPAT1Q99943 283 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.32■□□□□ 0.36
VRK2-204ENST00000428021 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.32■□□□□ 0.36
VRK2-204ENST00000428021 EBF1Q9UH73 591 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 TMEM59LQ9UK28 342 aa17.32■□□□□ 0.36
VRK2-204ENST00000428021 EP300Q09472 2414 aaPredicted RBP17.32■□□□□ 0.36
VRK2-204ENST00000428021 SYNJ2BP-COX16A0A087WUM0 186 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 GOLGA8SH3BPF8 625 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 APOEP02649 317 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 HLA-FP30511 346 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 GBP1P32455 592 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 CNR2P34972 360 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 FLT3P36888 993 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 DGKEP52429 567 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 RPS24P62847 133 aaKnown RBP17.31■□□□□ 0.36
VRK2-204ENST00000428021 TPM4P67936 248 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 CENPCQ03188 943 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 EOGTQ5NDL2 527 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 TMEM215Q68D42 235 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 KIAA0907Q7Z7F0 614 aaPredicted RBP17.31■□□□□ 0.36
VRK2-204ENST00000428021 MSANTD4Q8NCY6 345 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 TSTD1Q8NFU3 115 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 WFDC5Q8TCV5 224 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 BTN2A3PQ96KV6 586 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 PRMT1Q99873 361 aaKnown RBP17.31■□□□□ 0.36
VRK2-204ENST00000428021 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
VRK2-204ENST00000428021 COX16Q9P0S2 106 aa17.31■□□□□ 0.36
VRK2-204ENST00000428021 PTPRZ1P23471 2315 aaPredicted RBP17.31■□□□□ 0.36
VRK2-204ENST00000428021 LRRC53A6NM62 1247 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 GOLGA6L19H0YKK7 550 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 M0QYT0 321 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 AXIN1O15169 862 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 TBL1XO60907 577 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 SLC2A3P11169 496 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 NTSR1P30989 418 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 CCR1P32246 355 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 WASP42768 502 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 UBASH3AP57075 661 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 NME3Q13232 169 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
VRK2-204ENST00000428021 ARCQ7LC44 396 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 BNIPLQ7Z465 357 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 PHLDB2Q86SQ0 1253 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 RASSF3Q86WH2 238 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 PHF13Q86YI8 300 aaPredicted RBP17.3■□□□□ 0.36
VRK2-204ENST00000428021 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.3■□□□□ 0.36
VRK2-204ENST00000428021 ATP6V0D2Q8N8Y2 350 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 HJURPQ8NCD3 748 aaPredicted RBP17.3■□□□□ 0.36
VRK2-204ENST00000428021 PGAP3Q96FM1 320 aaPredicted RBP17.3■□□□□ 0.36
VRK2-204ENST00000428021 LMLNQ96KR4 655 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 C11orf70Q9BRQ4 267 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 EDEM3Q9BZQ6 932 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 PIGVQ9NUD9 493 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 ELOVL2Q9NXB9 296 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 RRN3Q9NYV6 651 aa17.3■□□□□ 0.36
VRK2-204ENST00000428021 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
VRK2-204ENST00000428021 CFAP54Q96N23 3096 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 A0A1W2PQF6 199 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 TACR2P21452 398 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 CXCR3P49682 368 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 SLC25A52Q3SY17 297 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 FIGNQ5HY92 759 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 RAP1GAP2Q684P5 730 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 TRMT11Q7Z4G4 463 aaKnown RBP17.29■□□□□ 0.36
VRK2-204ENST00000428021 LGI2Q8N0V4 545 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 CFAP52Q8N1V2 620 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 TBCBQ99426 244 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 GABRG3Q99928 467 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 ANLNQ9NQW6 1124 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 METTL5Q9NRN9 209 aaKnown RBP17.29■□□□□ 0.36
VRK2-204ENST00000428021 AIPL1Q9NZN9 384 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 STIM2Q9P246 746 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 THAP10Q9P2Z0 257 aaPredicted RBP17.29■□□□□ 0.36
VRK2-204ENST00000428021 SLC12A6Q9UHW9 1150 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
VRK2-204ENST00000428021 WASH3PC4AMC7 463 aa17.28■□□□□ 0.36
VRK2-204ENST00000428021 I6L893 689 aaPredicted RBP17.28■□□□□ 0.36
VRK2-204ENST00000428021 CCDC172P0C7W6 258 aa17.28■□□□□ 0.36
VRK2-204ENST00000428021 ABCB4P21439 1286 aa17.28■□□□□ 0.36
VRK2-204ENST00000428021 CD70P32970 193 aa17.28■□□□□ 0.36
VRK2-204ENST00000428021 SULT1E1P49888 294 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms