RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CAPN2P17655 700 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 PDK1Q15118 436 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 TNFAIP8L3Q5GJ75 292 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 SYCP2LQ5T4T6 812 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 FAXCQ5TGI0 409 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 ANKLE1Q8NAG6 615 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 PAWRQ96IZ0 340 aaKnown RBP27.36■■□□□ 1.97
LDB1-202ENST00000425280 SERPINB12Q96P63 405 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 OXCT2Q9BYC2 517 aaPredicted RBP27.36■■□□□ 1.97
LDB1-202ENST00000425280 KLC2Q9H0B6 622 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 OSBPL2Q9H1P3 480 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 C11orf49Q9H6J7 331 aa27.36■■□□□ 1.97
LDB1-202ENST00000425280 IFI35P80217 286 aaPredicted RBP27.35■■□□□ 1.97
LDB1-202ENST00000425280 SMARCB1Q12824 385 aa27.35■■□□□ 1.97
LDB1-202ENST00000425280 BRMS1LQ5PSV4 323 aa27.35■■□□□ 1.97
LDB1-202ENST00000425280 ANKMY2Q8IV38 441 aa27.35■■□□□ 1.97
LDB1-202ENST00000425280 TP53INP2Q8IXH6 220 aa27.35■■□□□ 1.97
LDB1-202ENST00000425280 WDR83Q9BRX9 315 aaKnown RBP27.35■■□□□ 1.97
LDB1-202ENST00000425280 ETNK1Q9HBU6 452 aa27.35■■□□□ 1.97
LDB1-202ENST00000425280 GMIPQ9P107 970 aa27.35■■□□□ 1.97
LDB1-202ENST00000425280 A0A087WUV0 522 aaPredicted RBP27.34■■□□□ 1.97
LDB1-202ENST00000425280 LRIG2O94898 1065 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 AGTP01019 485 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 MAGEA6P43360 314 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 STAT4Q14765 748 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 PDIK1LQ8N165 341 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 VN1R3Q9BXE9 311 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 PRDM12Q9H4Q4 367 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 ZMYND8Q9ULU4 1186 aaPredicted RBP27.34■■□□□ 1.97
LDB1-202ENST00000425280 FAM92AA1XBS5 289 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 METTL18O95568 372 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 HAPLN1P10915 354 aaPredicted RBP27.34■■□□□ 1.97
LDB1-202ENST00000425280 MGAT5BQ3V5L5 792 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 DENND5BQ6ZUT9 1274 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 ARHGAP18Q8N392 663 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 ARFGAP2Q8N6H7 521 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 SEPT5Q99719 369 aaPredicted RBP27.34■■□□□ 1.97
LDB1-202ENST00000425280 CDY1Q9Y6F8 540 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 LTBP2Q14767 1821 aa27.34■■□□□ 1.97
LDB1-202ENST00000425280 PPP1R12AO14974 1030 aaPredicted RBP27.33■■□□□ 1.97
LDB1-202ENST00000425280 ITGB8P26012 769 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 CCR1P32246 355 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 GLUD2P49448 558 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 PPP2R2AP63151 447 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 AP1B1Q10567 949 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 BBS9Q3SYG4 887 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 PDZD4Q76G19 769 aaPredicted RBP27.33■■□□□ 1.97
LDB1-202ENST00000425280 TOP1MTQ969P6 601 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 IGSF21Q96ID5 467 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 HAPLN3Q96S86 360 aa27.33■■□□□ 1.97
LDB1-202ENST00000425280 YWHAQP27348 245 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 EPHB2P29323 1055 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 MTM1Q13496 603 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 USP41Q3LFD5 358 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 TTC19Q6DKK2 380 aaPredicted RBP27.32■■□□□ 1.96
LDB1-202ENST00000425280 MSANTD2Q6P1R3 559 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 RNF168Q8IYW5 571 aaPredicted RBP27.32■■□□□ 1.96
LDB1-202ENST00000425280 VPS52Q8N1B4 723 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 NPWQ8N729 165 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 FBXO22Q8NEZ5 403 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 PYROXD1Q8WU10 500 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 C2orf15Q8WU43 125 aaKnown RBP27.32■■□□□ 1.96
LDB1-202ENST00000425280 P2RY11Q96G91 374 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 SPATA17Q96L03 361 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 CCDC77Q9BR77 488 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 VPS37BQ9H9H4 285 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 RAD54BQ9Y620 910 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 CLUHO75153 1309 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 A0A0A0MRY4 1105 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 ADAM12O43184 909 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 RTN3O95197 1032 aaPredicted RBP27.32■■□□□ 1.96
LDB1-202ENST00000425280 GPX6P59796 221 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 DUSP4Q13115 394 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 PPP2R5DQ14738 602 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 ANKRD20A2Q5SQ80 823 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 ANKRD20A1Q5TYW2 823 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 ANKRD20A3Q5VUR7 823 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 PPP1R21Q6ZMI0 780 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 ARHGEF18Q6ZSZ5 1173 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 CCNYQ8ND76 341 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 SPATA13Q96N96 652 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 STMN4Q9H169 189 aaPredicted RBP27.32■■□□□ 1.96
LDB1-202ENST00000425280 MTRRQ9UBK8 725 aa27.32■■□□□ 1.96
LDB1-202ENST00000425280 ABHD14A-ACY1A0A1B0GW23 586 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 PAGE1O75459 146 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 IVLP07476 585 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 GNGT1P63211 74 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 CAPN12Q6ZSI9 719 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 ZNF771Q7L3S4 317 aaPredicted RBP27.31■■□□□ 1.96
LDB1-202ENST00000425280 TMCO2Q7Z6W1 182 aaPredicted RBP27.31■■□□□ 1.96
LDB1-202ENST00000425280 FBXO36Q8NEA4 188 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 FBXO32Q969P5 355 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 SERPINB11Q96P15 392 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 SIK2Q9H0K1 926 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 CTNNAL1Q9UBT7 734 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 NEU3Q9UQ49 428 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 APRTP07741 180 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 SLC12A6Q9UHW9 1150 aa27.31■■□□□ 1.96
LDB1-202ENST00000425280 GREB1Q4ZG55 1949 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 TRIM43BA6NCK2 446 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms