RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PRDM16Q9HAZ2 1276 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 HESX1Q9UBX0 185 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 SFMBT1Q9UHJ3 866 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 SLCO1B1Q9Y6L6 691 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 FREM2Q5SZK8 3169 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 DSPP15924 2871 aaKnown RBP13.53□□□□□ -0.24
VRK3-203ENST00000424804 NPC1O15118 1278 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 CALCAP01258 141 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 KRT5P13647 590 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 ERCC5P28715 1186 aaPredicted RBP13.53□□□□□ -0.24
VRK3-203ENST00000424804 HLA-FP30511 346 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 USP8P40818 1118 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 TPMTP51580 245 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 SGSHP51688 502 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 SLC8A3P57103 927 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 BSPRYQ5W0U4 402 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 ANKS1BQ7Z6G8 1248 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 ADIPOR2Q86V24 386 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 TMPRSS6Q8IU80 811 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 IRF2BP1Q8IU81 584 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 WFDC5Q8TCV5 224 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 SLC35F5Q8WV83 523 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 EDEM1Q92611 657 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 PLD4Q96BZ4 506 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 THAP9Q9H5L6 903 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
VRK3-203ENST00000424804 SAMSN1Q9NSI8 373 aaKnown RBP13.53□□□□□ -0.24
VRK3-203ENST00000424804 KLK13Q9UKR3 277 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 NFE2L3Q9Y4A8 694 aa13.53□□□□□ -0.24
VRK3-203ENST00000424804 METTL12A8MUP2 240 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 PMM2O15305 246 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 SH3BP5O60239 455 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 TSPAN3O60637 253 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 OPHN1O60890 802 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 CBFA2T3O75081 653 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 IGLV3-27P01718 113 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 FYNP06241 537 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 VDRP11473 427 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 HLA-EP13747 358 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 SLC9A1P19634 815 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 BCAT1P54687 386 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 DAOAP59103 153 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 SIM1P81133 766 aaPredicted RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 APBA1Q02410 837 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 BST2Q10589 180 aaKnown RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 KCNJ12Q14500 433 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 STX1AQ16623 288 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 MAN2A1Q16706 1144 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 PTPRNQ16849 979 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 CAVIN1Q6NZI2 390 aaKnown RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 PMF1Q6P1K2 205 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 LCLAT1Q6UWP7 414 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 C11orf57Q6ZUT1 292 aaPredicted RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 RABEPKQ7Z6M1 372 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 RAB44Q7Z6P3 723 aaPredicted RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.52□□□□□ -0.25
VRK3-203ENST00000424804 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 MYEOVQ96EZ4 313 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 GPR174Q9BXC1 333 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 SLC32A1Q9H598 525 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 MSRB2Q9Y3D2 182 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 HBS1LQ9Y450 684 aaKnown RBP13.52□□□□□ -0.25
VRK3-203ENST00000424804 NEUROG3Q9Y4Z2 214 aa13.52□□□□□ -0.25
VRK3-203ENST00000424804 PTPRBP23467 1997 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 GOLGA6L7A0A1B0GV03 622 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 TAF4O00268 1085 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 MSI1O43347 362 aaKnown RBP13.51□□□□□ -0.25
VRK3-203ENST00000424804 TIMM44O43615 452 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 NDUFS2O75306 463 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 BRD2P25440 801 aaKnown RBP13.51□□□□□ -0.25
VRK3-203ENST00000424804 ADIGQ0VDE8 80 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 GRIK2Q13002 908 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 SLC14A1Q13336 389 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 EIF4HQ15056 248 aaKnown RBP13.51□□□□□ -0.25
VRK3-203ENST00000424804 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 PLEKHG6Q3KR16 790 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 MPPE1Q53F39 396 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 FAM133BQ5BKY9 247 aaKnown RBP13.51□□□□□ -0.25
VRK3-203ENST00000424804 DCAF12L1Q5VU92 463 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 DBX2Q6ZNG2 339 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 RSRC2Q7L4I2 434 aaKnown RBP13.51□□□□□ -0.25
VRK3-203ENST00000424804 RGL4Q8IZJ4 473 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 CHCHD4Q8N4Q1 142 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 CLEC4CQ8WTT0 213 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 DDI1Q8WTU0 396 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 FOXJ1Q92949 421 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 SIPA1Q96FS4 1042 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 MYO19Q96H55 970 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 KREMEN1Q96MU8 473 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 IL21RQ9HBE5 538 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms