RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TRIM29Q14134 588 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 SEPT6Q14141 434 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 KMT5BQ4FZB7 885 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 RAB11FIP2Q7L804 512 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 SPATS2Q86XZ4 545 aaKnown RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 DAW1Q8N136 415 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 SLC25A45Q8N413 288 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 MFSD2AQ8NA29 543 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 TPCN2Q8NHX9 752 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 CACTINQ8WUQ7 758 aaKnown RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 JPH3Q8WXH2 748 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 OVCA2Q8WZ82 227 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 PCED1BQ96HM7 432 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 PKMYT1Q99640 499 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 FUCA2Q9BTY2 467 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 DUSP23Q9BVJ7 150 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 CALN1Q9BXU9 219 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 ELOVL4Q9GZR5 314 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 PABPC3Q9H361 631 aaKnown RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 KDM4CQ9H3R0 1056 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 ZHX3Q9H4I2 956 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 USP29Q9HBJ7 922 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 CUEDC1Q9NWM3 386 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 NLGN3Q9NZ94 848 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 MAP10Q9P2G4 905 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 LARSQ9P2J5 1176 aaKnown RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 TUBD1Q9UJT1 453 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 SCML1Q9UN30 329 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 ATP8B3O60423 1300 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 TCHHQ07283 1943 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 MYO18AQ92614 2054 aaKnown RBP6.64□□□□□ -1.35
SDCBP-203ENST00000424270 MYOFQ9NZM1 2061 aa6.64□□□□□ -1.35
SDCBP-203ENST00000424270 NBPF19A0A087WUL8 3843 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 ARHGAP10A1A4S6 786 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TTLL8A6PVC2 850 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 MUSKO15146 869 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 MID1O15344 667 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 SEMA7AO75326 666 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TCEA3O75764 348 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 UBE4BO95155 1302 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 IL18RAPO95256 599 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TBX18O95935 607 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 HMBSP08397 361 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 HGFP14210 728 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 RPS6KB1P23443 525 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 LMO2P25791 158 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 UGT1A5P35504 534 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 CHKAP35790 457 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 PSMD8P48556 350 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TUBP50607 506 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 CCR5P51681 352 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 KLRB1Q12918 225 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 ENPP2Q13822 863 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 DSG2Q14126 1118 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 LACTB2Q53H82 288 aaPredicted RBP6.63□□□□□ -1.35
SDCBP-203ENST00000424270 C10orf120Q5SQS8 335 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 C1QL3Q5VWW1 255 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 RINT1Q6NUQ1 792 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 FAM171BQ6P995 826 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 USP30Q70CQ3 517 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 OR6B3Q8NGW1 331 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 MYCBPAPQ8TBZ2 947 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 HTR3CQ8WXA8 447 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 WASF1Q92558 559 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 MYOCQ99972 504 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 LARP6Q9BRS8 491 aaKnown RBP6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TIPINQ9BVW5 301 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 RAB34Q9BZG1 259 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 NEUROG2Q9H2A3 272 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TMEM60Q9H2L4 133 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 EBF2Q9HAK2 575 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 CRTAC1Q9NQ79 661 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 PRSS16Q9NQE7 514 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 TLR8Q9NR97 1041 aaKnown RBP6.63□□□□□ -1.35
SDCBP-203ENST00000424270 DNAJC28Q9NX36 388 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 NCKIPSDQ9NZQ3 722 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 SUN2Q9UH99 717 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 AGO2Q9UKV8 859 aaKnown RBP6.63□□□□□ -1.35
SDCBP-203ENST00000424270 PCDHGA7Q9Y5G6 932 aa6.63□□□□□ -1.35
SDCBP-203ENST00000424270 ANAPC1Q9H1A4 1944 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 A0A0B4J269 797 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PRR19A6NJB7 356 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 EFCAB7A8K855 629 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 NOBOXO60393 691 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 NEBLO76041 1014 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 CNTN5O94779 1100 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PRKCGP05129 697 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 KRT18P05783 430 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ATP5BP06576 529 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 TMEM191BP0C7N4 346 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 RARGP13631 454 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PSMA5P28066 241 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 NOS2P35228 1153 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 CD97P48960 835 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 RPIAP49247 311 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ATP1A2P50993 1020 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 MAPK10P53779 464 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SLC5A3P53794 718 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms