RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SETD3Q86TU7 594 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-204ENST00000424143 GDPD5Q8WTR4 605 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 NAT14Q8WUY8 206 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 KHSRPQ92945 711 aaKnown RBP eCLIP15.67■□□□□ 0.16e-6■■■■□ 21
C9orf3-204ENST00000424143 HEXIM2Q96MH2 286 aaKnown RBP15.67■□□□□ 0.1
C9orf3-204ENST00000424143 SPATA13Q96N96 652 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 APOL6Q9BWW8 343 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 NT5C1AQ9BXI3 368 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 Q9H521 79 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 XPNPEP3Q9NQH7 507 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-204ENST00000424143 COPG2Q9UBF2 871 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 TMCO1Q9UM00 188 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 PSMD13Q9UNM6 376 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 CCDC195A0A1B0GUA6 201 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 ITM2AO43736 263 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 OPHN1O60890 802 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 PRKCGP05129 697 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 ZCCHC18P0CG32 403 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SRGAP2CP0DJJ0 459 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 KITP10721 976 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 ITGAXP20702 1163 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 RPL34P49207 117 aaKnown RBP15.66■□□□□ 0.1
C9orf3-204ENST00000424143 RBP5P82980 135 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SLC25A3Q00325 362 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 MBTD1Q05BQ5 628 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 C15orf59Q2T9L4 293 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SPANXN3Q5MJ09 141 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SH3PXD2AQ5TCZ1 1133 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 PDPK2PQ6A1A2 396 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 EPGNQ6UW88 154 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 MAVSQ7Z434 540 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 ARHGAP22Q7Z5H3 698 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 LCA5Q86VQ0 697 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 EGFL6Q8IUX8 553 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SLC7A14Q8TBB6 771 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 IRGQQ8WZA9 623 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 DGCR14Q96DF8 476 aaKnown RBP15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SERPINI1Q99574 410 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 CPNE1Q99829 537 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 MARCOQ9UEW3 520 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-204ENST00000424143 STK39Q9UEW8 545 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 MID2Q9UJV3 735 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 ADAMTS6Q9UKP5 1117 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 RAB26Q9ULW5 256 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 PADI4Q9UM07 663 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 HEY1Q9Y5J3 304 aa15.66■□□□□ 0.1
C9orf3-204ENST00000424143 SPDYE16A6NNV3 312 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 LACTBL1A8MY62 500 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 H3BNX3 289 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 STRNO43815 780 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 KRT19P08727 400 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 RALBP11234 206 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 CYP3A5P20815 502 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 TCF7P36402 384 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 GP5P40197 560 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 RGS2P41220 211 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HIRAP54198 1017 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HERC3Q15034 1050 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 USP41Q3LFD5 358 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 NOL9Q5SY16 702 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 EEF1DP3Q658K8 133 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 RFX8Q6ZV50 586 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 SREK1Q8WXA9 508 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 OPTNQ96CV9 577 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HPDLQ96IR7 371 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HMGXB4Q9UGU5 601 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ZSWIM8A7E2V4 1837 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 TPP1O14773 563 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 MPOP05164 745 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ITGA2BP08514 1039 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 NFICP08651 508 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 COX4I1P13073 169 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HADHAP40939 763 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HSPA13P48723 471 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HDAC4P56524 1084 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 RPL10AP62906 217 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 MAP7Q14244 749 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 PDK3Q15120 406 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ADRM1Q16186 407 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 MDH1BQ5I0G3 518 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 MAP1SQ66K74 1059 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ARHGAP17Q68EM7 881 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 RIOX2Q8IUF8 465 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 MPP5Q8N3R9 675 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 CPSF7Q8N684 471 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ICA1LQ8NDH6 482 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 SLC26A7Q8TE54 656 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 SLC35F5Q8WV83 523 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 TFB1MQ8WVM0 346 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ZFRQ96KR1 1074 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 DDX50Q9BQ39 737 aaKnown RBP15.65■□□□□ 0.1
C9orf3-204ENST00000424143 FERMT1Q9BQL6 677 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 PTTG2Q9NZH5 202 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 ATXN10Q9UBB4 475 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 HESX1Q9UBX0 185 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 TSPAN16Q9UKR8 245 aa15.65■□□□□ 0.1
C9orf3-204ENST00000424143 A0A0G2JMZ2 1700 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 LRRC37A2A6NM11 1700 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 H0YJX3 145 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms