RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SLC35C1Q96A29 364 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 LHX5Q9H2C1 402 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 CNGB3Q9NQW8 809 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 ABCB8Q9NUT2 735 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 GGA2Q9UJY4 613 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 PLA2G4CQ9UP65 541 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 PLXNB3Q9ULL4 1909 aa16.84■□□□□ 0.29
COL18A1-205ENST00000423214 M0QYV0 167 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 GJB3O75712 270 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 IGLV3-19P01714 112 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 HLA-FP30511 346 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 PMS1P54277 932 aaKnown RBP16.83■□□□□ 0.28
COL18A1-205ENST00000423214 DAOAP59103 153 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 TRIP6Q15654 476 aaKnown RBP16.83■□□□□ 0.28
COL18A1-205ENST00000423214 CCDC40Q4G0X9 1142 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 TMEM270Q6UE05 265 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 CHCHD4Q8N4Q1 142 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 OR2T3Q8NH03 318 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 CYB5D2Q8WUJ1 264 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 KCTD13Q8WZ19 329 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 TMA16Q96EY4 203 aaKnown RBP16.83■□□□□ 0.28
COL18A1-205ENST00000423214 CAMK1GQ96NX5 476 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 FBRSQ9HAH7 460 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 METTL14Q9HCE5 456 aaKnown RBP16.83■□□□□ 0.28
COL18A1-205ENST00000423214 EIF2B4Q9UI10 523 aaKnown RBP16.83■□□□□ 0.28
COL18A1-205ENST00000423214 KIAA1257Q9ULG3 409 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 PCDHB4Q9Y5E5 795 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 ZZEF1O43149 2961 aa16.83■□□□□ 0.28
COL18A1-205ENST00000423214 TYW5A2RUC4 315 aaKnown RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 METTL12A8MUP2 240 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 BCAT2O15382 392 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 PAEPP09466 180 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 PABPC1P11940 636 aaKnown RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 MATKP42679 507 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 SLC11A2P49281 568 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 FMO5P49326 533 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 RGS7P49802 495 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 CETN1Q12798 172 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 CAMK2GQ13555 558 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 STILQ15468 1287 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 NUGGCQ68CJ6 796 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 MSANTD2Q6P1R3 559 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 IL27RAQ6UWB1 636 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 LCLAT1Q6UWP7 414 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 SCML4Q8N228 414 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 PPM1KQ8N3J5 372 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 UBR7Q8N806 425 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 ZNF366Q8N895 744 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 ZNF557Q8N988 423 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 ERCC4Q92889 916 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 PCED1AQ9H1Q7 454 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 STOML2Q9UJZ1 356 aa16.82■□□□□ 0.28
COL18A1-205ENST00000423214 ANKRD11Q6UB99 2663 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-205ENST00000423214 SPEGQ15772 3267 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 PIK3R2O00459 728 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 TBL1XO60907 577 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 LTFP02788 710 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 DNTTP04053 509 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 ATP5BP06576 529 aaKnown RBP16.81■□□□□ 0.28
COL18A1-205ENST00000423214 FTH1P19P0C7X4 201 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 TTC31Q49AM3 519 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-205ENST00000423214 UNC45BQ8IWX7 931 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.81■□□□□ 0.283e-14■■■□□ 14.9
COL18A1-205ENST00000423214 IRGQQ8WZA9 623 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 GAREM1Q9H706 876 aa16.81■□□□□ 0.28
COL18A1-205ENST00000423214 RALYQ9UKM9 306 aaKnown RBP16.81■□□□□ 0.28
COL18A1-205ENST00000423214 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL18A1-205ENST00000423214 APOBEC2Q9Y235 224 aaKnown RBP16.81■□□□□ 0.28
COL18A1-205ENST00000423214 SRRM3A6NNA2 597 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-205ENST00000423214 IRAK2O43187 625 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 POLR2EP19388 210 aaKnown RBP16.8■□□□□ 0.28
COL18A1-205ENST00000423214 BRD2P25440 801 aaKnown RBP16.8■□□□□ 0.28
COL18A1-205ENST00000423214 PPP1R2P41236 205 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 SGSHP51688 502 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 PKDCCQ504Y2 493 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 MBLAC2Q68D91 279 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 RFWD3Q6PCD5 774 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 RAB44Q7Z6P3 723 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-205ENST00000423214 MFN1Q8IWA4 741 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 SETD7Q8WTS6 366 aaKnown RBP16.8■□□□□ 0.28
COL18A1-205ENST00000423214 TFAP2BQ92481 460 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 CEP63Q96MT8 703 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 TMEM245Q9H330 911 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 TM7SF3Q9NS93 570 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 ZFYVE26Q68DK2 2539 aa16.8■□□□□ 0.28
COL18A1-205ENST00000423214 FBXO21O94952 628 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 SEMA4FO95754 770 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 IGLV3-27P01718 113 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 AFF3P51826 1226 aaKnown RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 TBX4P57082 545 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 ST8SIA6P61647 398 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 ZBTB16Q05516 673 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 TEAD4Q15561 434 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 MPP7Q5T2T1 576 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 ZNF776Q68DI1 518 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 KLHL10Q6JEL2 608 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms