RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
PKP4-204ENST00000421462 NIF3L1Q9GZT8 377 aa17.11■□□□□ 0.33
PKP4-204ENST00000421462 SORCS3Q9UPU3 1222 aa17.11■□□□□ 0.33
PKP4-204ENST00000421462 M0QYV0 167 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 LSM8O95777 96 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 TSHRP16473 764 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 SFNP31947 248 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 GABRB2P47870 512 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 RGS7P49802 495 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 LPIN1Q14693 890 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 RCN3Q96D15 328 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 TMEM39BQ9GZU3 492 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 XPNPEP3Q9NQH7 507 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 FBXO21O94952 628 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 PTPN1P18031 435 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 EIF4BP23588 611 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 ZNF132P52740 706 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 EMP3P54852 163 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 ABCE1P61221 599 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 ZNF554Q86TJ5 538 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 FAM160B2Q86V87 743 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 PLD5Q8N7P1 536 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 NIPA2Q8N8Q9 360 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 ZFRQ96KR1 1074 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 EBNA1BP2Q99848 306 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 DHX35Q9H5Z1 703 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 HMGXB4Q9UGU5 601 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 FEM1BQ9UK73 627 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 ERVK-10P10266 1014 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 P4HA1P13674 534 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 CDH2P19022 906 aaPredicted RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 L1CAMP32004 1257 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 ENTPD1P49961 510 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 YWHAEP62258 255 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 CPNE9Q8IYJ1 553 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 RBM38Q9H0Z9 239 aaKnown RBP17.1■□□□□ 0.33
PKP4-204ENST00000421462 FIS1Q9Y3D6 152 aa17.1■□□□□ 0.33
PKP4-204ENST00000421462 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 TRDMT1O14717 391 aaKnown RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 DENRO43583 198 aaKnown RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 PSMC3P17980 439 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 CA9Q16790 459 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 RNF168Q8IYW5 571 aaPredicted RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 DSELQ8IZU8 1212 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 TSPAN14Q8NG11 270 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 NLRP7Q8WX94 980 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 RXFP2Q8WXD0 754 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 WRNIP1Q96S55 665 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 CASQ2O14958 399 aaPredicted RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 MLH1P40692 756 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 CLDN10P78369 228 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 PLOD1Q02809 727 aaPredicted RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 TFDP2Q14188 446 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 ADGRE1Q14246 886 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 ANKDD1AQ495B1 522 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 PPP1R2P3Q6NXS1 205 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 UNKQ9C0B0 810 aaKnown RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 ADA2Q9NZK5 511 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 C6orf203Q9P0P8 240 aaPredicted RBP17.09■□□□□ 0.33
PKP4-204ENST00000421462 EFR3BQ9Y2G0 817 aa17.09■□□□□ 0.33
PKP4-204ENST00000421462 COL16A1Q07092 1604 aaPredicted RBP17.08■□□□□ 0.33
PKP4-204ENST00000421462 CCDC78A2IDD5 438 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 NR1H2P55055 460 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 NAA20P61599 178 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 OLIG2Q13516 323 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 FSCBQ5H9T9 825 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 KRT80Q6KB66 452 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 PQLC3Q8N755 202 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 RNF157Q96PX1 679 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 SDCBP2Q9H190 292 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 EPB41L1Q9H4G0 881 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 CAB39LQ9H9S4 337 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 PNPLA8Q9NP80 782 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 SEPT10Q9P0V9 454 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 GMEB1Q9Y692 573 aa17.08■□□□□ 0.33
PKP4-204ENST00000421462 GLRA3O75311 464 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 ZNF189O75820 626 aaPredicted RBP17.08■□□□□ 0.32
PKP4-204ENST00000421462 CHRNGP07510 517 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 CPA3P15088 417 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 MAGEA8P43361 318 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 ART3Q13508 389 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 DLG2Q15700 870 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 POTEAQ6S8J7 498 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 NAPRTQ6XQN6 538 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 BNC2Q6ZN30 1099 aaPredicted RBP17.08■□□□□ 0.32
PKP4-204ENST00000421462 PLD6Q8N2A8 252 aaKnown RBP17.08■□□□□ 0.32
PKP4-204ENST00000421462 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms