RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 FBXL5Q9UKA1 691 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 NEDD8-MDP1E9PL57 170 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 DNTTP04053 509 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 KRT4P19013 534 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 HSPA9P38646 679 aaKnown RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 CASP5P51878 434 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 TSPAN1O60635 241 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 PPP2R2AP63151 447 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 JAMLQ86YT9 394 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 COLGALT1Q8NBJ5 622 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 C2orf15Q8WU43 125 aaKnown RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 A0A1W2PQ45 241 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 A0A1W2PQY0 241 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 CYP2A7P20853 494 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 CLCNKBP51801 687 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 OTOAQ7RTW8 1153 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 KCNK18Q7Z418 384 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SDK1Q7Z5N4 2213 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 MED8Q96G25 268 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 FAR2Q96K12 515 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 RGS18Q9NS28 235 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 COL20A1Q9P218 1284 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ZMYM5Q9UJ78 669 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 GLI3P10071 1580 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SYNDIG1LA6NDD5 238 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 XPO1O14980 1071 aaKnown RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SERPINB8P50452 374 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 RIC8BQ9NVN3 520 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 WHRNQ9P202 907 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 CCDC22O60826 627 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 KRT72Q14CN4 511 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SGO1Q5FBB7 561 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SPOCD1Q6ZMY3 1216 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF571Q7Z3V5 609 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 PPP1R36Q96LQ0 422 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ATP5HO75947 161 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 OCM2P0CE71 109 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 NCALDP61601 193 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 PPP4R4Q6NUP7 873 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 GPATCH2LQ9NWQ4 482 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 KIAA1522Q9P206 1035 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 PEX10O60683 326 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SMAD3P84022 425 aaKnown RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 POU6F1Q14863 301 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 GLMNQ92990 594 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 TRIM51Q9BSJ1 452 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 DHX33Q9H6R0 707 aaKnown RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ADA2Q9NZK5 511 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF112Q9UJU3 913 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ARHGAP26Q9UNA1 814 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 CLDN5O00501 218 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 PTPN2P17706 415 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 GRM3Q14832 879 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 FBXO46Q6PJ61 603 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH1-206ENST00000421141 VAT1Q99536 393 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 UNC93B1Q9H1C4 597 aa11.01□□□□□ -0.65
PTCH1-206ENST00000421141 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 PDZK1P1A8MUH7 402 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF7P17097 686 aaPredicted RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 ANXA11P50995 505 aaKnown RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 DLG4P78352 724 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 AAK1Q2M2I8 961 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 ERLEC1Q96DZ1 483 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 PANX3Q96QZ0 392 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 UBP1Q9NZI7 540 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 VPS51Q9UID3 782 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 BMP10O95393 424 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 PRUNE1Q86TP1 453 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 TMEM121Q9BTD3 319 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 NDEL1Q9GZM8 345 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 PDZD7Q9H5P4 517 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 A0A1B0GUA9 196 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 TISP43B9A030 160 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 FAM47E-STBD1D6RA91 191 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 ARL2P36404 184 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 XRCC4Q13426 336 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 CDKAL1Q5VV42 579 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 RAP1GAP2Q684P5 730 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 GSPT2Q8IYD1 628 aaKnown RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 WDR24Q96S15 920 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 SYTL2Q9HCH5 934 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 ZFP69BQ9UJL9 534 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 NUDT5Q9UKK9 219 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 CDYLQ9Y232 598 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 KANSL1LA0AUZ9 987 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 TRUB2O95900 331 aaKnown RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 KCNJ1P48048 391 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms