RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 PDPK2PQ6A1A2 396 aa16.35■□□□□ 0.21
TRIM13-204ENST00000420995 DEFB107AQ8IZN7 70 aa16.35■□□□□ 0.21
TRIM13-204ENST00000420995 GDPD5Q8WTR4 605 aa16.35■□□□□ 0.21
TRIM13-204ENST00000420995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 PAPSS1O43252 624 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 KLHL2O95198 593 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 SERPINE1P05121 402 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 VAV1P15498 845 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 EDNRBP24530 442 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 SERPINB6P35237 376 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 GMPSP49915 693 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 INCA1Q0VD86 236 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 HNRNPDQ14103 355 aaKnown RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 STILQ15468 1287 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 HEATR6Q6AI08 1181 aaKnown RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 CES3Q6UWW8 571 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 FRMD7Q6ZUT3 714 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 MARK2Q7KZI7 788 aaKnown RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ADGRG6Q86SQ4 1221 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 CLEC4CQ8WTT0 213 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 TBCBQ99426 244 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 LGMNQ99538 433 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 SIKE1Q9BRV8 207 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 RNPEPQ9H4A4 650 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 TMEM216Q9P0N5 145 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 GAS2O43903 313 aaKnown RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 OPHN1O60890 802 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ITGA2BP08514 1039 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ITGAXP20702 1163 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 MGAT1P26572 445 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ATICP31939 592 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 GRIA2P42262 883 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 IGBP1P78318 339 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 SLC6A3Q01959 620 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ITGA9Q13797 1035 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 PGM2L1Q6PCE3 622 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ACOT1Q86TX2 421 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 PPP4R1Q8TF05 950 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 TFB1MQ8WVM0 346 aaKnown RBP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 QKIQ96PU8 341 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM13-204ENST00000420995 LPIN3Q9BQK8 851 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 MAN1C1Q9NR34 630 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 DTLQ9NZJ0 730 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 HESX1Q9UBX0 185 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ITGA11Q9UKX5 1188 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 POMPQ9Y244 141 aa16.34■□□□□ 0.21
TRIM13-204ENST00000420995 ANKRD33BA6NCL7 494 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 ZNF195O14628 629 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 DCXO43602 365 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 ALDH1A2O94788 518 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 RAG1P15918 1043 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 CNTFP26441 200 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 MED21Q13503 144 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 CUL3Q13618 768 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 TRIP10Q15642 601 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 TREML2Q5T2D2 321 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 NCAPG2Q86XI2 1143 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 TNS4Q8IZW8 715 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 ACTRT2Q8TDY3 377 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 ATP2A3Q93084 1043 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 ATXN7L3BQ96GX2 97 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 KLHL4Q9C0H6 718 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 VRTNQ9H8Y1 702 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 MTMR10Q9NXD2 777 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 PACSIN3Q9UKS6 424 aa16.33■□□□□ 0.21
TRIM13-204ENST00000420995 SF3B1O75533 1304 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRIM13-204ENST00000420995 A6NJR5 290 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 CD1EP15812 388 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 USP4Q13107 963 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 TMEM132DQ14C87 1099 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 STEAP4Q687X5 459 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 ST13P4Q8IZP2 240 aaPredicted RBP16.33■□□□□ 0.2
TRIM13-204ENST00000420995 PYROXD2Q8N2H3 581 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 CSPG4P5Q96PW8 444 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 STN1Q9H668 368 aaKnown RBP16.33■□□□□ 0.2
TRIM13-204ENST00000420995 IFT122Q9HBG6 1241 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 ZDHHC7Q9NXF8 308 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 COPG2Q9UBF2 871 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 AP4E1Q9UPM8 1137 aa16.33■□□□□ 0.2
TRIM13-204ENST00000420995 KLHL33A6NCF5 533 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 STK10O94804 968 aaKnown RBP16.32■□□□□ 0.2
TRIM13-204ENST00000420995 BTKQ06187 659 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 DPYSL2Q16555 572 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
TRIM13-204ENST00000420995 AEBP2Q6ZN18 517 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-204ENST00000420995 CCDC185Q8N715 623 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 AGR3Q8TD06 166 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 ACMSDQ8TDX5 336 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 ARNTL2Q8WYA1 636 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 CDKL2Q92772 493 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 COPS5Q92905 334 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 KCTD15Q96SI1 283 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-204ENST00000420995 GORASP1Q9BQQ3 440 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 CENPKQ9BS16 269 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 PDZD7Q9H5P4 517 aa16.32■□□□□ 0.2
TRIM13-204ENST00000420995 E9PBE3 544 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms