RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 RELL1Q8IUW5 271 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 RNF168Q8IYW5 571 aaPredicted RBP13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 CRYBG2Q8N1P7 616 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 TTC25Q96NG3 672 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 CATSPER2Q96P56 530 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 SNX25Q9H3E2 840 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 PTTG2Q9NZH5 202 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 HSFX1Q9UBD0 423 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
SFTPA1-202ENST00000419470 DDHD2O94830 711 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 MICAL2O94851 1124 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 ABHD2P08910 425 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 RRM1P23921 792 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 MAN1A1P33908 653 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 CD151P48509 253 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 HPCAP84074 193 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 THOC5Q13769 683 aaKnown RBP13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 STILQ15468 1287 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 C2CD6Q53TS8 623 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 OSTM1Q86WC4 334 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 HOMEZQ8IX15 550 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 UVRAGQ9P2Y5 699 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 SPAG7O75391 227 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 PDGFRBP09619 1106 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 PAX3P23760 479 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 ITGB8P26012 769 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 IVDP26440 423 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 RFC2P35250 354 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 RAP1GDS1P52306 607 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 ITGA8P53708 1063 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 PTK6Q13882 451 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 COLGALT2Q8IYK4 626 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 TMEM86AQ8N2M4 240 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 LRRC43Q8N309 656 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 CD101Q93033 1021 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 CASD1Q96PB1 797 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 NUP85Q9BW27 656 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 CYTH4Q9UIA0 394 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 TSPAN16Q9UKR8 245 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 GRID1Q9ULK0 1009 aa13.74□□□□□ -0.21
SFTPA1-202ENST00000419470 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 KIAA0355O15063 1070 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 DNAJC6O75061 913 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 TIMP1P01033 207 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 ANPEPP15144 967 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 COMTP21964 271 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 GPD2P43304 727 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 PAN2Q504Q3 1202 aaKnown RBP13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 CNKSR3Q6P9H4 555 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 UBE2Q1Q7Z7E8 422 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 PHLDB2Q86SQ0 1253 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 TDRPQ86YL5 185 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 ZNF564Q8TBZ8 553 aaPredicted RBP13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 SMC6Q96SB8 1091 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 TRABDQ9H4I3 376 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 NDE1Q9NXR1 346 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 LRFN2Q9ULH4 789 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 NUMBLQ9Y6R0 609 aa13.73□□□□□ -0.21
SFTPA1-202ENST00000419470 F8W810 466 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 M0QYV0 167 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 M0QZQ0 153 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 GAS8O95995 478 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 ITGB1P05556 798 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 SERPINB3P29508 390 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 CDC16Q13042 620 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 PKDCCQ504Y2 493 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 PLEKHA7Q6IQ23 1121 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 NPAS4Q8IUM7 802 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 ZNF75CPQ92670 426 aaPredicted RBP13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 MPP4Q96JB8 637 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 TNIP3Q96KP6 325 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 FAM49BQ9NUQ9 324 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 TAS2R1Q9NYW7 299 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 ANAPC5Q9UJX4 755 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 A0A0J9YVX5 310 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 CFAP69A5D8W1 941 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 TMEM110-MUSTN1A8MSY1 372 aa13.72□□□□□ -0.21
SFTPA1-202ENST00000419470 TMEM189-UBE2V1I3L0A0 370 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms