RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 RALBP11234 206 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 MMP8P22894 467 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 TBXAS1P24557 533 aaPredicted RBP12.02□□□□□ -0.48
DDR1-232ENST00000418800 ARL1P40616 181 aaPredicted RBP12.02□□□□□ -0.48
DDR1-232ENST00000418800 NME5P56597 212 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 MYBPC2Q14324 1141 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 ZACNQ401N2 412 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 CCDC80Q76M96 950 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 FNDC8Q8TC99 324 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 RMND5BQ96G75 393 aaPredicted RBP12.02□□□□□ -0.48
DDR1-232ENST00000418800 CIB1Q99828 191 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 GPAMQ9HCL2 828 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 TUBGCP4Q9UGJ1 667 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 BCAP29Q9UHQ4 241 aa12.02□□□□□ -0.48
DDR1-232ENST00000418800 A0A1B0GUL6 1792 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 BCORQ6W2J9 1755 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 AGRPO00253 132 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 BUD23O43709 281 aaKnown RBP12.02□□□□□ -0.49
DDR1-232ENST00000418800 DNAJA2O60884 412 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 ERVK-10P10266 1014 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 EGFLAMQ63HQ2 1017 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 TATDN1Q6P1N9 297 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 UGT2A3Q6UWM9 527 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 IFNEQ86WN2 208 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 MCF2L2Q86YR7 1114 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 PLGRKTQ9HBL7 147 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
DDR1-232ENST00000418800 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 CIDEBQ9UHD4 219 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 DRG1Q9Y295 367 aaKnown RBP12.02□□□□□ -0.49
DDR1-232ENST00000418800 FBP2O00757 339 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 TPP1O14773 563 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 P4HA1P13674 534 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 CASP2P42575 452 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 TFDP2Q14188 446 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 FSCBQ5H9T9 825 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 PPM1LQ5SGD2 360 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 AAGABQ6PD74 315 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 SPATA6LQ8N4H0 392 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 FAM47BQ8NA70 645 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 MCPH1Q8NEM0 835 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 CCDC28BQ9BUN5 200 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 C17orf75Q9HAS0 396 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 ARHGEF4Q9NR80 690 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 GTSE1Q9NYZ3 720 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 GMEB1Q9Y692 573 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
DDR1-232ENST00000418800 GPC4O75487 556 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 RXRBP28702 533 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 HOXD12P35452 270 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 GNA12Q03113 381 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 ITGA7Q13683 1181 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 PRPSAP1Q14558 356 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 PTPN20Q4JDL3 420 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 BNC2Q6ZN30 1099 aaPredicted RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 RNF111Q6ZNA4 994 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 NUP93Q8N1F7 819 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 NAT16Q8N8M0 369 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 LENG8Q96PV6 779 aaPredicted RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 ASNSD1Q9NWL6 643 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 MYH9P35579 1960 aaKnown RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 XRCC1P18887 633 aaPredicted RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 POU5F1BQ06416 359 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 BNIP3Q12983 259 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 LRRC8EQ6NSJ5 796 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 POTEHQ6S545 545 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 FBXW8Q8N3Y1 598 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 CRYGNQ8WXF5 182 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 GFM2Q969S9 779 aaKnown RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 GPATCH1Q9BRR8 931 aaKnown RBP12.01□□□□□ -0.49
DDR1-232ENST00000418800 CAB39LQ9H9S4 337 aa12.01□□□□□ -0.49
DDR1-232ENST00000418800 PSAPP07602 524 aa12□□□□□ -0.49
DDR1-232ENST00000418800 BPGMP07738 259 aa12□□□□□ -0.49
DDR1-232ENST00000418800 NR3C2P08235 984 aa12□□□□□ -0.49
DDR1-232ENST00000418800 COX4I1P13073 169 aa12□□□□□ -0.49
DDR1-232ENST00000418800 CCDC130P13994 396 aa12□□□□□ -0.49
DDR1-232ENST00000418800 CDH3P22223 829 aa12□□□□□ -0.49
DDR1-232ENST00000418800 KRT76Q01546 638 aa12□□□□□ -0.49
DDR1-232ENST00000418800 NME3Q13232 169 aa12□□□□□ -0.49
DDR1-232ENST00000418800 EMC2Q15006 297 aa12□□□□□ -0.49
DDR1-232ENST00000418800 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
DDR1-232ENST00000418800 CHST15Q7LFX5 561 aaPredicted RBP12□□□□□ -0.49
DDR1-232ENST00000418800 RNF149Q8NC42 400 aa12□□□□□ -0.49
DDR1-232ENST00000418800 EXT2Q93063 718 aa12□□□□□ -0.49
DDR1-232ENST00000418800 UBP1Q9NZI7 540 aa12□□□□□ -0.49
DDR1-232ENST00000418800 PSMD13Q9UNM6 376 aa12□□□□□ -0.49
DDR1-232ENST00000418800 CROCCQ5TZA2 2017 aa12□□□□□ -0.49
DDR1-232ENST00000418800 ZNF541Q9H0D2 1346 aa12□□□□□ -0.49
DDR1-232ENST00000418800 APOL1O14791 398 aa12□□□□□ -0.49
DDR1-232ENST00000418800 VNN1O95497 513 aa12□□□□□ -0.49
DDR1-232ENST00000418800 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
DDR1-232ENST00000418800 JAK3P52333 1124 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms