RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 AGAP3Q96P47 875 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MKS1Q9NXB0 559 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NUMBLQ9Y6R0 609 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 RRN3P2A6NIE6 340 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TPP1O14773 563 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 LIN7AO14910 233 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PGAM1P18669 254 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PEX19P40855 299 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MATKP42679 507 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TAF6P49848 677 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 OCRLQ01968 901 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ADIGQ0VDE8 80 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 WASHC5Q12768 1159 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 R3HDM1Q15032 1099 aaKnown RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PKDCCQ504Y2 493 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 LRRC74BQ6ZQY2 392 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SNX27Q96L92 541 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 EIF2AQ9BY44 585 aaKnown RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NMRK1Q9NWW6 199 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 KCNH4Q9UQ05 1017 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 M0QYT0 321 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ACADSP16219 412 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SLC1A6P48664 564 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 AP2B1P63010 937 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 RBM15BQ8NDT2 890 aaKnown RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SCG3Q8WXD2 468 aaKnown RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ATXN7L3BQ96GX2 97 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TSNARE1Q96NA8 513 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SIKE1Q9BRV8 207 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NXF3Q9H4D5 531 aaKnown RBP12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 BFARQ9NZS9 450 aa12.04□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 KLHL2O95198 593 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SERPINA6P08185 405 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 DEUP1Q05D60 604 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TRMT5Q32P41 509 aaKnown RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SV2CQ496J9 727 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NCBP2-AS2Q69YL0 99 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 LRRC8BQ6P9F7 803 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PACS1Q6VY07 963 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NETO2Q8NC67 525 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 P2RY11Q96G91 374 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TTC1Q99614 292 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MAGEB5Q9BZ81 275 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 XPNPEP3Q9NQH7 507 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SCOCQ9UIL1 159 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 EEF2KO00418 725 aaKnown RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 HCRTO43612 131 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NCF2P19878 526 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 LMO2P25791 158 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 HIC1Q14526 733 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SLC25A52Q3SY17 297 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TAPT1Q6NXT6 567 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PIGZQ86VD9 579 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ADGRF2Q8IZF7 708 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 UNC5BQ8IZJ1 945 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 GTF3C2Q8WUA4 911 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ARHGEF4Q9NR80 690 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 STX18Q9P2W9 335 aaKnown RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 CORO1CQ9ULV4 474 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 LRCH1Q9Y2L9 728 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PRR5-ARHGAP8B1AHC4 643 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MFSD11O43934 449 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TOP3BO95985 862 aaKnown RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 CYP2C9P11712 490 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 GRK2P25098 689 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PSMB4P28070 264 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ARHGAP8P85298 464 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 WDR60Q8WVS4 1066 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NDE1Q9NXR1 346 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 RCOR3Q9P2K3 495 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SORCS3Q9UPU3 1222 aa12.03□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MAGEC1O60732 1142 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SERPINE1P05121 402 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ITGA2BP08514 1039 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SCNN1AP37088 669 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 NAB1Q13506 487 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 TMEM154Q6P9G4 183 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MARK2Q7KZI7 788 aaKnown RBP12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 LINC01465Q8N7H1 131 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 MOCS1Q9NZB8 636 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 ZNF212Q9UDV6 495 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 SOX13Q9UN79 622 aa12.02□□□□□ -0.48
CSPG4P3Y-201ENST00000418188 E2F8A0AVK6 867 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 KCNK1O00180 336 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 GP5P40197 560 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms