RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 NLRP1Q9C000 1473 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 DNMBPQ6XZF7 1577 aa5.74□□□□□ -1.49
RFC4-204ENST00000417876 ADGRL2O95490 1459 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 POLA1P09884 1462 aaPredicted RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 AGAP5A6NIR3 686 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 LINC00473A8K010 186 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 H0YIZ8 118 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 NKX2-8O15522 239 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 EPB41L2O43491 1005 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 TFRCP02786 760 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 CNPP09543 421 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 ATP1A3P13637 1013 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 LIFRP42702 1097 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 NR1H2P55055 460 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 TPTEP56180 551 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 GPC5P78333 572 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 MPP1Q00013 466 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 UBE3AQ05086 875 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 LMAN2Q12907 356 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 RNASE12Q5GAN4 147 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 ZNF484Q5JVG2 852 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 L1TD1Q5T7N2 865 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 KIAA1324Q6UXG2 1013 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 Q6YL49 198 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 ZNF551Q7Z340 670 aaPredicted RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 LCORLQ8N3X6 602 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 PNPLA1Q8N8W4 532 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 RP9Q8TA86 221 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 CLEC4CQ8WTT0 213 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 KTI12Q96EK9 354 aaPredicted RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 KAZALD1Q96I82 304 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 SEC62Q99442 399 aaKnown RBP5.73□□□□□ -1.49
RFC4-204ENST00000417876 RASSF1Q9NS23 344 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 AMFRQ9UKV5 643 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 SLC12A4Q9UP95 1085 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 KIAA1107Q9UPP5 1409 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 ZNF521Q96K83 1311 aa5.73□□□□□ -1.49
RFC4-204ENST00000417876 RAD54L2Q9Y4B4 1467 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 KAT6BQ8WYB5 2073 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 A6NLC8 198 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 C1QTNF3-AMACRE9PGA6 284 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 KAT7O95251 611 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 TMIGD3P0DMS9 266 aaPredicted RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 IGHMBP2P38935 993 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 SUMO2P61956 95 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 RBM6P78332 1123 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 RAE1P78406 368 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 PTPAQ15257 358 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 MAPRE1Q15691 268 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 SPATS1Q496A3 300 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 MAP3K21Q5TCX8 1036 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 SYNE3Q6ZMZ3 975 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 CENPQQ7L2Z9 268 aaPredicted RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 LINS1Q8NG48 757 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 EDC3Q96F86 508 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 MACROD1Q9BQ69 325 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 REEP2Q9BRK0 252 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 ELOVL1Q9BW60 279 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 FSD1LQ9BXM9 530 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 UBN1Q9NPG3 1134 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 FOXJ2Q9P0K8 574 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 ST3GAL5Q9UNP4 418 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 UBE2J1Q9Y385 318 aaPredicted RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 WDR62O43379 1518 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 EPRSP07814 1512 aaKnown RBP5.72□□□□□ -1.49
RFC4-204ENST00000417876 CLASP1Q7Z460 1538 aa5.72□□□□□ -1.49
RFC4-204ENST00000417876 TOPBP1Q92547 1522 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 KDM5DQ9BY66 1539 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 GRID2IPA4D2P6 1211 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 NARSO43776 548 aaKnown RBP5.71□□□□□ -1.5
RFC4-204ENST00000417876 TMPRSS11DO60235 418 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 EIF5BO60841 1220 aaKnown RBP5.71□□□□□ -1.5
RFC4-204ENST00000417876 URI1O94763 535 aaPredicted RBP5.71□□□□□ -1.5
RFC4-204ENST00000417876 ESRRBO95718 433 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 CD4P01730 458 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 CSF1P09603 554 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 HKR1P10072 659 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 TGM1P22735 817 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 MMP8P22894 467 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 GALNSP34059 522 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 GRIA3P42263 894 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 RNASELQ05823 741 aaKnown RBP5.71□□□□□ -1.5
RFC4-204ENST00000417876 GAB1Q13480 694 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 LAIR1Q6GTX8 287 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 KIRREL2Q6UWL6 708 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 Q6ZPA2 131 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 SLC2A12Q8TD20 617 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 HVCN1Q96D96 273 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 SNX18Q96RF0 628 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 CDCP1Q9H5V8 836 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 SLC13A4Q9UKG4 626 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 ADAMTS5Q9UNA0 930 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 RRP7AQ9Y3A4 280 aaKnown RBP5.71□□□□□ -1.5
RFC4-204ENST00000417876 CCDC144AA2RUR9 1427 aa5.71□□□□□ -1.5
RFC4-204ENST00000417876 CENPJQ9HC77 1338 aaPredicted RBP5.71□□□□□ -1.5
RFC4-204ENST00000417876 NESP48681 1621 aa5.7□□□□□ -1.5
RFC4-204ENST00000417876 EIF3AQ14152 1382 aaKnown RBP5.7□□□□□ -1.5
RFC4-204ENST00000417876 VWA3AA6NCI4 1184 aa5.7□□□□□ -1.5
RFC4-204ENST00000417876 ZNF213O14771 459 aa5.7□□□□□ -1.5
RFC4-204ENST00000417876 CYP3A4P08684 503 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms