RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 MPP4Q96JB8 637 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 TRIM54Q9BYV2 358 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 AHCYL1O43865 530 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 SNX3O60493 162 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 TSPAN1O60635 241 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 KRT8P05787 483 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 ARHGDIAP52565 204 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 ZNF792Q3KQV3 632 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 LRRC74BQ6ZQY2 392 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 PGBD3Q8N328 593 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 ULBP1Q9BZM6 244 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 MYLK2Q9H1R3 596 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 ARHGEF9O43307 516 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 KRT16P08779 473 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 SLC10A3P09131 477 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 INPP5AQ14642 412 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TBCCQ15814 346 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TMEM120AQ9BXJ8 343 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 ATXN3LQ9H3M9 355 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 OXCT1P55809 520 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 CALML6Q8TD86 181 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 KLHL4Q9C0H6 718 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 DDX18Q9NVP1 670 aaKnown RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 PJA2O43164 708 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 POLBP06746 335 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 CTNNB1P35222 781 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 GEMP55040 296 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 OTUD4Q01804 1114 aaKnown RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 ROR2Q01974 943 aaKnown RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 ANKRD52Q8NB46 1076 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 RCCD1A6NED2 376 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 RHOCP08134 193 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TNFRSF8P28908 595 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 SERPINB9P50453 376 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 NSUN2Q08J23 767 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TTC39BQ5VTQ0 682 aaPredicted RBP13.15□□□□□ -0.3
SCAF8-203ENST00000417268 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 MREGQ8N565 214 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 CATSPER2Q96P56 530 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 SATB2Q9UPW6 733 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
SCAF8-203ENST00000417268 TRIM16O95361 564 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 MBTD1Q05BQ5 628 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 MROH9Q5TGP6 573 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 TMEM139Q8IV31 216 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 SLC25A41Q8N5S1 370 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ABCC13Q9NSE7 274 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 FKBP6O75344 327 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 HSPA13P48723 471 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 DENND1BQ6P3S1 775 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 CENPTQ96BT3 561 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 RMDN2Q96LZ7 410 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 DACH2Q96NX9 599 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 BTBD10Q9BSF8 475 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 VPS28Q9UK41 221 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 CORO1CQ9ULV4 474 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 AAR2Q9Y312 384 aaKnown RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ITGB4P16144 1822 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 LGR5O75473 907 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 DRD4P21917 467 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 NOS2P35228 1153 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 C9orf57Q5W0N0 161 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 TTC33Q6PID6 262 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 CARNMT1Q8N4J0 409 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 PTPRN2Q92932 1015 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 E2F8A0AVK6 867 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 OR6C75A6NL08 312 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 PMPCBO75439 489 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 NDUFS3O75489 264 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ARIH2O95376 493 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 USP17L7P0C7H9 530 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-203ENST00000417268 NUDT2P50583 147 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 CCNG2Q16589 344 aa13.14□□□□□ -0.31
SCAF8-203ENST00000417268 ZBTB18Q99592 522 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms