RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 MTCL1Q9Y4B5 1905 aaKnown RBP17.55■□□□□ 0.4
CALD1-204ENST00000417172 KCNU1A8MYU2 1149 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 RBL1P28749 1068 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
CALD1-204ENST00000417172 ITGA8P53708 1063 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 TBX4P57082 545 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 LMNB2Q03252 620 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 GPS1Q13098 491 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 BRMS1LQ5PSV4 323 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 HDXQ7Z353 690 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 TCEAL8Q8IYN2 117 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 NPWQ8N729 165 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 RSAD2Q8WXG1 361 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 SNF8Q96H20 258 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 SLC39A13Q96H72 371 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 PWWP2AQ96N64 755 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 KLHL5Q96PQ7 755 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 FMO2Q99518 471 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 FRMD8P1Q9BZ68 369 aaPredicted RBP17.55■□□□□ 0.4
CALD1-204ENST00000417172 ZNF334Q9HCZ1 680 aaPredicted RBP17.55■□□□□ 0.4
CALD1-204ENST00000417172 COMMD8Q9NX08 183 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 HSFX1Q9UBD0 423 aa17.55■□□□□ 0.4
CALD1-204ENST00000417172 DENND4CQ5VZ89 1909 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 SLC12A8A0AV02 714 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 MAP2K7O14733 419 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 CA3P07451 260 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 CSH1P0DML2 217 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 CSH2P0DML3 217 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 EPHB2P29323 1055 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 IRS1P35568 1242 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 PSEN1P49768 467 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 PPP2R5DQ14738 602 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
CALD1-204ENST00000417172 PIK3R6Q5UE93 754 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 DNAJB7Q7Z6W7 309 aaPredicted RBP17.54■□□□□ 0.4
CALD1-204ENST00000417172 C14orf80Q86SX3 495 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 SPPL3Q8TCT6 385 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 ART4Q93070 314 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 ABHD8Q96I13 439 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 MTIF3Q9H2K0 278 aaKnown RBP17.54■□□□□ 0.4
CALD1-204ENST00000417172 ADAM7Q9H2U9 754 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 USP29Q9HBJ7 922 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 HS3ST4Q9Y661 456 aa17.54■□□□□ 0.4
CALD1-204ENST00000417172 MYO18AQ92614 2054 aaKnown RBP17.54■□□□□ 0.4
CALD1-204ENST00000417172 TRANK1O15050 2925 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 ZNF840PA6NDX5 716 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 KCNN4O15554 427 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 TAF12Q16514 161 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 UBAP2Q5T6F2 1119 aaKnown RBP17.53■□□□□ 0.4
CALD1-204ENST00000417172 IZUMO3Q5VZ72 239 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 RWDD4Q6NW29 188 aaKnown RBP17.53■□□□□ 0.4
CALD1-204ENST00000417172 CCDC89Q8N998 374 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 EIF1ADQ8N9N8 165 aaKnown RBP17.53■□□□□ 0.4
CALD1-204ENST00000417172 LGMNQ99538 433 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 PCDH9Q9HC56 1237 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 DNAJC17Q9NVM6 304 aaKnown RBP17.53■□□□□ 0.4
CALD1-204ENST00000417172 WHRNQ9P202 907 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 HPCAL4Q9UM19 191 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 C2orf78A6NCI8 922 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 C2orf71A6NGG8 1288 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 CCDC85CA6NKD9 419 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 GRM6O15303 877 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 ZFXP17010 805 aaPredicted RBP17.53■□□□□ 0.4
CALD1-204ENST00000417172 RPL22P35268 128 aaKnown RBP17.53■□□□□ 0.4
CALD1-204ENST00000417172 CHKAP35790 457 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 IRAK1P51617 712 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 KCNQ1P51787 676 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 CALCOCO2Q13137 446 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 CAMK1Q14012 370 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 MYRFLQ96LU7 910 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 OLFM3Q96PB7 478 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 HAPLN3Q96S86 360 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 EPAS1Q99814 870 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 OSBPL2Q9H1P3 480 aa17.53■□□□□ 0.4
CALD1-204ENST00000417172 REV3LO60673 3130 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 NYNRINQ9P2P1 1898 aaKnown RBP17.52■□□□□ 0.4
CALD1-204ENST00000417172 NRG2O14511 850 aaPredicted RBP17.52■□□□□ 0.4
CALD1-204ENST00000417172 COCHO43405 550 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 VAV1P15498 845 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 PBX2P40425 430 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 VEPH1Q14D04 833 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 TRIP4Q15650 581 aaPredicted RBP17.52■□□□□ 0.4
CALD1-204ENST00000417172 LILRA6Q6PI73 481 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 RHBDF2Q6PJF5 856 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 TMC3Q7Z5M5 1100 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 CEP295NLQ96MC4 621 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 TLR9Q9NR96 1032 aa17.52■□□□□ 0.4
CALD1-204ENST00000417172 OLA1Q9NTK5 396 aaKnown RBP17.52■□□□□ 0.4
CALD1-204ENST00000417172 EPHB3P54753 998 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 CREMQ03060 361 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 DHX9Q08211 1270 aaKnown RBP17.51■□□□□ 0.39
CALD1-204ENST00000417172 PAFAH1B3Q15102 231 aaKnown RBP17.51■□□□□ 0.39
CALD1-204ENST00000417172 SLC45A4Q5BKX6 768 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 SYCP2LQ5T4T6 812 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 MANEALQ5VSG8 457 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 GPR65Q8IYL9 337 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 PSMG2Q969U7 264 aa17.51■□□□□ 0.39
CALD1-204ENST00000417172 QKIQ96PU8 341 aaKnown RBP eCLIP17.51■□□□□ 0.39
CALD1-204ENST00000417172 RNF38Q9H0F5 515 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms