RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 IL9RQ01113 521 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 KIF19Q2TAC6 998 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 CCDC157Q569K6 752 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 ANKS1BQ7Z6G8 1248 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 GOLGA5Q8TBA6 731 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 WFDC5Q8TCV5 224 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 TMEM174Q8WUU8 243 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 DUSP16Q9BY84 665 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 ELOVL2Q9NXB9 296 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 MARCH2Q9P0N8 246 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 SNX11Q9Y5W9 270 aa13.5□□□□□ -0.25
LINC00339-202ENST00000416769 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 BICDL2A1A5D9 508 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 SYNCRIPO60506 623 aaKnown RBP13.49□□□□□ -0.25
LINC00339-202ENST00000416769 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 P4HA1P13674 534 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 HOXD9P28356 352 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-202ENST00000416769 HLA-FP30511 346 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 MATKP42679 507 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 PAK1Q13153 545 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 NFIL3Q16649 462 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 PRAMEF14Q5SWL7 426 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 GLRX5Q86SX6 157 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
LINC00339-202ENST00000416769 PIGZQ86VD9 579 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-202ENST00000416769 TAF4BQ92750 862 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 LRIG1Q96JA1 1093 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 TSG101Q99816 390 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 NIF3L1Q9GZT8 377 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
LINC00339-202ENST00000416769 RWDD2AQ9UIY3 292 aa13.49□□□□□ -0.25
LINC00339-202ENST00000416769 CBX4O00257 560 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 MSI1O43347 362 aaKnown RBP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 RALAP11233 206 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 RDXP35241 583 aaKnown RBP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 RAD23BP54727 409 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 HNRNPDQ14103 355 aaKnown RBP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 SERPINA13PQ6UXR4 307 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 SLC4A11Q8NBS3 891 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 CADM4Q8NFZ8 388 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 DDI1Q8WTU0 396 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 EDEM1Q92611 657 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 TATDN2Q93075 761 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 BPIFA3Q9BQP9 254 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 ORAI3Q9BRQ5 295 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 ULBP1Q9BZM6 244 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 PNPLA8Q9NP80 782 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 CLIC5Q9NZA1 410 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 SFMBT1Q9UHJ3 866 aa13.48□□□□□ -0.25
LINC00339-202ENST00000416769 APOBEC2Q9Y235 224 aaKnown RBP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 GCN1Q92616 2671 aaKnown RBP13.48□□□□□ -0.25
LINC00339-202ENST00000416769 GOLGA6L7A0A1B0GV03 622 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 H0Y8X5 98 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 IKBKBO14920 756 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 DKK1O94907 266 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 NR2F2P24468 414 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
LINC00339-202ENST00000416769 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
LINC00339-202ENST00000416769 CYP4F3Q08477 520 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 PTPRNQ16849 979 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 DBX2Q6ZNG2 339 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 C11orf57Q6ZUT1 292 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-202ENST00000416769 RSRC2Q7L4I2 434 aaKnown RBP13.47□□□□□ -0.25
LINC00339-202ENST00000416769 TMPRSS7Q7RTY8 843 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 ADIPOR2Q86V24 386 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 FAM217AQ8IXS0 508 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 OR2T3Q8NH03 318 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 BIRC7Q96CA5 298 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 MYEOVQ96EZ4 313 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
LINC00339-202ENST00000416769 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 LHX5Q9H2C1 402 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 TMEM245Q9H330 911 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 CYP3A43Q9HB55 503 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 TM9SF3Q9HD45 589 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 ABCB8Q9NUT2 735 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 SERGEFQ9UGK8 458 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 CTNND2Q9UQB3 1225 aa13.47□□□□□ -0.25
LINC00339-202ENST00000416769 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-202ENST00000416769 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 TRABD2BA6NFA1 517 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 GABBR2O75899 941 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CER1O95813 267 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CALCAP01258 141 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 ACADMP11310 421 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CHKAP35790 457 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms