RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 GDF3Q9NR23 364 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 DRG1Q9Y295 367 aaKnown RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 GREB1Q4ZG55 1949 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ZNF638Q14966 1978 aaKnown RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 H0YGN5 161 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 H7C0C1 242 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 CCL16O15467 120 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 GGCXP38435 758 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ATP5OP48047 213 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ZNF135P52742 658 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 NOMO1Q15155 1222 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 CCNI2Q6ZMN8 369 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 SYDE1Q6ZW31 735 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ZC3H18Q86VM9 953 aaKnown RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ZNF276Q8N554 614 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 CASKIN2Q8WXE0 1202 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 SLCO2A1Q92959 643 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 NKD2Q969F2 451 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 ARHGEF4Q9NR80 690 aa12.99□□□□□ -0.33
PRAMEF9-201ENST00000415919 CCDC151A5D8V7 595 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 SGK1O00141 431 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 COCHO43405 550 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 CLASP2O75122 1294 aaKnown RBP12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 RBP3P10745 1247 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 H2AFXP16104 143 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 EPHB2P29323 1055 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 HCAR3P49019 387 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 SEMA3BQ13214 749 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 NCBP2-AS2Q69YL0 99 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 RWDD4Q6NW29 188 aaKnown RBP12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 DARS2Q6PI48 645 aaKnown RBP12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 RSAD2Q8WXG1 361 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 TMEM121Q9BTD3 319 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 SLC28A3Q9HAS3 691 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 TRPC7Q9HCX4 862 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 MAN1C1Q9NR34 630 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 ETNK2Q9NVF9 386 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 ASIC3Q9UHC3 531 aa12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 HBS1LQ9Y450 684 aaKnown RBP12.98□□□□□ -0.33
PRAMEF9-201ENST00000415919 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 PER2O15055 1255 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 LRIG2O94898 1065 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 KRT14P02533 472 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 F11P03951 625 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 ITGAVP06756 1048 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 ERCC2P18074 760 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 GABRR2P28476 465 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 NR2C2P49116 596 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 CARSP49589 748 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 TUBP50607 506 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 GBE1Q04446 702 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 DPYSQ14117 519 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 TRADDQ15628 312 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 MAP9Q49MG5 647 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 BZW1Q7L1Q6 419 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 RBM23Q86U06 439 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 DDX42Q86XP3 938 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 UNC45BQ8IWX7 931 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 SLC22A17Q8WUG5 538 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 GCNAQ96QF7 691 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 CORO1BQ9BR76 489 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 C10orf88Q9H8K7 445 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 XPO7Q9UIA9 1087 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 SNX24Q9Y343 169 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 MFHAS1Q9Y4C4 1052 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 HS3ST4Q9Y661 456 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 GBF1Q92538 1859 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 C2orf78A6NCI8 922 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 IFNB1P01574 187 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 MYL4P12829 197 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 EPCAMP16422 314 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 TNFRSF8P28908 595 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 CLCN6P51797 869 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 MLLT6P55198 1093 aaPredicted RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 COG7P83436 770 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 RING1Q06587 406 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 CUL1Q13616 776 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 PTK6Q13882 451 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 DUPD1Q68J44 220 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 PDZD4Q76G19 769 aaPredicted RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 MRPS31Q92665 395 aaKnown RBP12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 TBC1D31Q96DN5 1066 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 ASAH2Q9NR71 780 aa12.97□□□□□ -0.33
PRAMEF9-201ENST00000415919 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms