RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SV2AQ7L0J3 742 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 SCN4BQ8IWT1 228 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 TMEM86AQ8N2M4 240 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 NAT16Q8N8M0 369 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 SNRNP27Q8WVK2 155 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 PCMTD1Q96MG8 357 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 ERGIC2Q96RQ1 377 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 NUP58Q9BVL2 599 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 ITM2CQ9NQX7 267 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 SNX11Q9Y5W9 270 aa14.22□□□□□ -0.13
RAPGEF1-204ENST00000414781 ZNF840PA6NDX5 716 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ADCY5O95622 1261 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 IGLV3-19P01714 112 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 C4BPAP04003 597 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 RBP5P82980 135 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 PPP3CAQ08209 521 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ORC1Q13415 861 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 EXOC3L4Q17RC7 722 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ZACNQ401N2 412 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 C1orf220Q5T0J3 134 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 VSTM1Q6UX27 236 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ZNF574Q6ZN55 896 aaPredicted RBP14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 DENND5BQ6ZUT9 1274 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 FBXL13Q8NEE6 735 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 FAM81BQ96LP2 452 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ACOX2Q99424 681 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 PKMYT1Q99640 499 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 IMPG2Q9BZV3 1241 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 FAM117AQ9C073 453 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 SLC6A17Q9H1V8 727 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 MMRN2Q9H8L6 949 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 DDX43Q9NXZ2 648 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ANKMY1Q9P2S6 941 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ITGA11Q9UKX5 1188 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 ANKRD6Q9Y2G4 727 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 COQ4Q9Y3A0 265 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 DAAM1Q9Y4D1 1078 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 RAD54BQ9Y620 910 aa14.21□□□□□ -0.13
RAPGEF1-204ENST00000414781 LRRK2Q5S007 2527 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 SCAMP3O14828 347 aaKnown RBP14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 OAS1P00973 400 aaKnown RBP14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 TPM1P09493 284 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 GP1BBP13224 206 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 PCSK1P29120 753 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 CDC25BP30305 580 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 ILKQ13418 452 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 SGSM1Q2NKQ1 1148 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 ANO4Q32M45 955 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 FBXL19Q6PCT2 694 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 TRAPPC11Q7Z392 1133 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 DRC7Q8IY82 874 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 PDCL2Q8N4E4 241 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 EHBP1Q8NDI1 1231 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 ZNF516Q92618 1163 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 TAF4BQ92750 862 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 ZFRQ96KR1 1074 aaKnown RBP14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 ZNF578Q96N58 590 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 TTLL2Q9BWV7 592 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 RNF38Q9H0F5 515 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 CPNE5Q9HCH3 593 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 SPHK2Q9NRA0 654 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 RAB20Q9NX57 234 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 DPP3Q9NY33 737 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 GTF3C4Q9UKN8 822 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 TEP1Q99973 2627 aaKnown RBP14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 COL12A1Q99715 3063 aa14.2□□□□□ -0.14
RAPGEF1-204ENST00000414781 MYO18AQ92614 2054 aaKnown RBP14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 KNL1Q8NG31 2342 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 H0Y8X5 98 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 NPC1O15118 1278 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 HUS1O60921 280 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 LDOC1O95751 146 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 MBL2P11226 248 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 ANXA13P27216 316 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 ATICP31939 592 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 ACADVLP49748 655 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 TPMTP51580 245 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 VAC14Q08AM6 782 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 NCOA4Q13772 614 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 TRIM14Q14142 442 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 CBWD6Q4V339 395 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 CBWD3Q5JTY5 395 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 CBWD5Q5RIA9 395 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 SPECC1LQ69YQ0 1117 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 FAXDC2Q96IV6 333 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 CNDP2Q96KP4 475 aaKnown RBP14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 XPO6Q96QU8 1125 aaKnown RBP14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 EDEM3Q9BZQ6 932 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 MTMR12Q9C0I1 747 aa14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 DNAJC17Q9NVM6 304 aaKnown RBP14.19□□□□□ -0.14
RAPGEF1-204ENST00000414781 ITIH6Q6UXX5 1313 aa14.18□□□□□ -0.14
RAPGEF1-204ENST00000414781 TERTO14746 1132 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-204ENST00000414781 TEX33O43247 280 aa14.18□□□□□ -0.14
RAPGEF1-204ENST00000414781 ACAT1P24752 427 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-204ENST00000414781 PIK3CAP42336 1068 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms