RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 PABPC1P11940 636 aaKnown RBP16.17■□□□□ 0.18
ACTB-202ENST00000414620 HOXD12P35452 270 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 ZNF445P59923 1031 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 APBA1Q02410 837 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 GFPT1Q06210 699 aaPredicted RBP16.17■□□□□ 0.18
ACTB-202ENST00000414620 FAM133BQ5BKY9 247 aaKnown RBP16.17■□□□□ 0.18
ACTB-202ENST00000414620 NUGGCQ68CJ6 796 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 FAM124AQ86V42 546 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 SCUBE3Q8IX30 993 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 CEP76Q8TAP6 659 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 ADAM32Q8TC27 787 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 DQX1Q8TE96 717 aaKnown RBP16.17■□□□□ 0.18
ACTB-202ENST00000414620 WFIKKN2Q8TEU8 576 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 PRCCQ92733 491 aaPredicted RBP16.17■□□□□ 0.18
ACTB-202ENST00000414620 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
ACTB-202ENST00000414620 CAPN10Q9HC96 672 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 GGA2Q9UJY4 613 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 NAALADL1Q9UQQ1 740 aa16.17■□□□□ 0.18
ACTB-202ENST00000414620 PLXNA2O75051 1894 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 FGFR1OPO95684 399 aaKnown RBP16.16■□□□□ 0.18
ACTB-202ENST00000414620 MOCS2O96007 188 aaPredicted RBP16.16■□□□□ 0.18
ACTB-202ENST00000414620 FYNP06241 537 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 SERPINF2P08697 491 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 ACADMP11310 421 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 CSRP1P21291 193 aaKnown RBP16.16■□□□□ 0.18
ACTB-202ENST00000414620 CD70P32970 193 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 USP8P40818 1118 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 GPD2P43304 727 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 SLC11A2P49281 568 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 TPMTP51580 245 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 ST3GAL2Q16842 350 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 ARHGAP44Q17R89 818 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 PLEKHG6Q3KR16 790 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 PIK3R6Q5UE93 754 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 MBLAC2Q68D91 279 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 NADSYN1Q6IA69 706 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 TAC4Q86UU9 113 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 ADIPOR2Q86V24 386 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 UNC45BQ8IWX7 931 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 AHI1Q8N157 1196 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 HDDC3Q8N4P3 179 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 MINDY1Q8N5J2 469 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 MYEOVQ96EZ4 313 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 ZNF419Q96HQ0 510 aaPredicted RBP16.16■□□□□ 0.18
ACTB-202ENST00000414620 FCRL2Q96LA5 508 aaPredicted RBP16.16■□□□□ 0.18
ACTB-202ENST00000414620 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 WSB2Q9NYS7 404 aaPredicted RBP16.16■□□□□ 0.18
ACTB-202ENST00000414620 KIAA1468Q9P260 1216 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 RWDD2AQ9UIY3 292 aa16.16■□□□□ 0.18
ACTB-202ENST00000414620 E5RJQ4 531 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 KRT37O76014 449 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 TOP3BO95985 862 aaKnown RBP16.15■□□□□ 0.18
ACTB-202ENST00000414620 SLC9A1P19634 815 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 SPINK2P20155 84 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 GNA15P30679 374 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 UBE2HP62256 183 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 E2F5Q15329 346 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 SYCP2LQ5T4T6 812 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 TRIM65Q6PJ69 517 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 RABEPKQ7Z6M1 372 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 MFN1Q8IWA4 741 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 ZCCHC9Q8N567 271 aaKnown RBP16.15■□□□□ 0.18
ACTB-202ENST00000414620 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.15■□□□□ 0.181e-24■■■□□ 16.3
ACTB-202ENST00000414620 OR2T3Q8NH03 318 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 MED15Q96RN5 788 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 NUCKS1Q9H1E3 243 aaKnown RBP16.15■□□□□ 0.18
ACTB-202ENST00000414620 MIR1-1HGQ9H1L0 117 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 TJP2Q9UDY2 1190 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 XPO7Q9UIA9 1087 aaKnown RBP16.15■□□□□ 0.18
ACTB-202ENST00000414620 CNTN6Q9UQ52 1028 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 PCNX2A6NKB5 2137 aa16.15■□□□□ 0.18
ACTB-202ENST00000414620 BECN2A8MW95 431 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 ARHGAP33O14559 1287 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 CAPN9O14815 690 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 PAPSS1O43252 624 aaPredicted RBP16.14■□□□□ 0.17
ACTB-202ENST00000414620 MED7O43513 233 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 TIMM44O43615 452 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 OPHN1O60890 802 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 CEACAM1P13688 526 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 RPS24P62847 133 aaKnown RBP16.14■□□□□ 0.17
ACTB-202ENST00000414620 RING1Q06587 406 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 PTPRNQ16849 979 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 WDR45BQ5MNZ6 344 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 DCAF12L1Q5VU92 463 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 METTL3Q86U44 580 aaKnown RBP16.14■□□□□ 0.17
ACTB-202ENST00000414620 CFAP52Q8N1V2 620 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 CARNMT1Q8N4J0 409 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 HJURPQ8NCD3 748 aaPredicted RBP16.14■□□□□ 0.17
ACTB-202ENST00000414620 ZNF606Q8WXB4 792 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 FOXJ1Q92949 421 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 LHX5Q9H2C1 402 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 TMEM245Q9H330 911 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 MTG2Q9H4K7 406 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 PLA2G4CQ9UP65 541 aa16.14■□□□□ 0.17
ACTB-202ENST00000414620 MAP1BP46821 2468 aaKnown RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 TPRP12270 2363 aaKnown RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 SPAARA0A1B0GVQ0 90 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms