RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 MOCS2O96007 188 aaPredicted RBP17.08■□□□□ 0.32
LINC00398-201ENST00000414407 DRD1P21728 446 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
LINC00398-201ENST00000414407 MAGEA9P43362 315 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 RPS9P46781 194 aaKnown RBP17.08■□□□□ 0.32
LINC00398-201ENST00000414407 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC00398-201ENST00000414407 UBXN2BQ14CS0 331 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 PON2Q15165 354 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 C15orf59Q2T9L4 293 aaPredicted RBP17.08■□□□□ 0.32
LINC00398-201ENST00000414407 DGKKQ5KSL6 1271 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 PIK3R6Q5UE93 754 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 SYNPOQ8N3V7 929 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 CLDN23Q96B33 292 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 C1orf74Q96LT6 269 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 PNKPQ96T60 521 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 SLC2A11Q9BYW1 496 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 FOXQ1Q9C009 403 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 TKTL2Q9H0I9 626 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 FBXO10Q9UK96 956 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 F5P12259 2224 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 COL4A3Q01955 1670 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 GOLGA6L7A0A1B0GV03 622 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 TULP3O75386 442 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 LCA5LO95447 670 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 H2AFZP0C0S5 128 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 TMEM253P0C7T8 217 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 SLC6A4P31645 630 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 VCPP55072 806 aaKnown RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 GSDMDP57764 484 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 FZD5Q13467 585 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 LRRC32Q14392 662 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 ACAP1Q15027 740 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 FBXO43Q4G163 708 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 MS4A13Q5J8X5 152 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 RNF43Q68DV7 783 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 H2AFVQ71UI9 128 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 ZNF557Q8N988 423 aaPredicted RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 CCDC26Q8TAB7 109 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 DDI1Q8WTU0 396 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 FAM172AQ8WUF8 416 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 CTNNBL1Q8WYA6 563 aaPredicted RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 HAPLN3Q96S86 360 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 NCAPGQ9BPX3 1015 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 SPTLC3Q9NUV7 552 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 DEC1Q9P2X7 70 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 XPO7Q9UIA9 1087 aaKnown RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 INTUQ9ULD6 942 aa17.07■□□□□ 0.32
LINC00398-201ENST00000414407 NDRG2Q9UN36 371 aaKnown RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 MTF2Q9Y483 593 aaPredicted RBP17.07■□□□□ 0.32
LINC00398-201ENST00000414407 TYW5A2RUC4 315 aaKnown RBP17.06■□□□□ 0.32
LINC00398-201ENST00000414407 CCP110O43303 1012 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 PAGE1O75459 146 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 CHRNB1P11230 501 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 TACR2P21452 398 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
LINC00398-201ENST00000414407 GRIA2P42262 883 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 SLC6A11P48066 632 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 NUBP1P53384 320 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
LINC00398-201ENST00000414407 AIF1P55008 147 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 HDAC4P56524 1084 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 OGDHQ02218 1023 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 CCINQ13939 588 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 CDO1Q16878 200 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 SH3PXD2AQ5TCZ1 1133 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 FSTL4Q6MZW2 842 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 NUDT18Q6ZVK8 323 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 C12orf40Q86WS4 652 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 FAM131BQ86XD5 332 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 PHTF2Q8N3S3 785 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 SPC24Q8NBT2 197 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 HJURPQ8NCD3 748 aaPredicted RBP17.06■□□□□ 0.32
LINC00398-201ENST00000414407 NTAN1Q96AB6 310 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 IER2Q9BTL4 223 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 LRFN3Q9BTN0 628 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 DLGAP2Q9P1A6 1054 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 LCMT1Q9UIC8 334 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 SLC27A6Q9Y2P4 619 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 HS3ST4Q9Y661 456 aa17.06■□□□□ 0.32
LINC00398-201ENST00000414407 F5H5T6 163 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 PI15O43692 258 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 TSPAN3O60637 253 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 KAT7O95251 611 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 APODP05090 189 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 PSMA2P25787 234 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 HOXD9P28356 352 aaPredicted RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 ADRA1BP35368 520 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 AUHQ13825 339 aaKnown RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 C5orf22Q49AR2 442 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 TTC39BQ5VTQ0 682 aaPredicted RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 RAP1GAP2Q684P5 730 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 NAIF1Q69YI7 327 aaPredicted RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 CHSY1Q86X52 802 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms