RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DGKEP52429 567 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 TRIM14Q14142 442 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 EIF4HQ15056 248 aaKnown RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 TDRD12Q587J7 1177 aaKnown RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 RABGAP1LQ5R372 815 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 TTC39BQ5VTQ0 682 aaPredicted RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 ACAD10Q6JQN1 1059 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 TSSK4Q6SA08 328 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 PHTF2Q8N3S3 785 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 ZNF513Q8N8E2 541 aaPredicted RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 WFIKKN2Q8TEU8 576 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 CPLX3Q8WVH0 158 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 PGAP3Q96FM1 320 aaPredicted RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 VCPIP1Q96JH7 1222 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 PPP1R9BQ96SB3 815 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 PCDHB18PQ96TA0 734 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 NPY6RQ99463 290 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 HAUS4Q9H6D7 363 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
CHD1-202ENST00000414220 FAM86C1Q9NVL1 165 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 MMP17Q9ULZ9 603 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 CAPN11Q9UMQ6 739 aa15.25■□□□□ 0.03
CHD1-202ENST00000414220 GOLGA6L7A0A1B0GV03 622 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 MOCS3O95396 460 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 KLF8O95600 359 aaPredicted RBP15.24■□□□□ 0.03
CHD1-202ENST00000414220 APBB3O95704 486 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 CISD3P0C7P0 127 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 GZMAP12544 262 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 PDGFRAP16234 1089 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 TACR2P21452 398 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 PBX1P40424 430 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 OXCT1P55809 520 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
CHD1-202ENST00000414220 CDH18Q13634 790 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 ARL13BQ3SXY8 428 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 C2CD6Q53TS8 623 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 MS4A13Q5J8X5 152 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 RAP1GAP2Q684P5 730 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 DNAJC24Q6P3W2 148 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 RFWD3Q6PCD5 774 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 MFN1Q8IWA4 741 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 CHPFQ8IZ52 775 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 AHI1Q8N157 1196 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 CCDC33Q8N5R6 958 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 ALLCQ8N6M5 410 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 TXNDC5Q8NBS9 432 aaKnown RBP15.24■□□□□ 0.03
CHD1-202ENST00000414220 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 EZH1Q92800 747 aaPredicted RBP15.24■□□□□ 0.03
CHD1-202ENST00000414220 TTYH3Q9C0H2 523 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 STIM2Q9P246 746 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 RAB23Q9ULC3 237 aa15.24■□□□□ 0.03
CHD1-202ENST00000414220 PROB1E7EW31 1015 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 H0Y626 953 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 ATP5BP06576 529 aaKnown RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 HOXD9P28356 352 aaPredicted RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 NTSR1P30989 418 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 KIR2DL1P43626 348 aaPredicted RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 EIF4EBP2Q13542 120 aaPredicted RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 SPECC1LQ69YQ0 1117 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 DCUN1D2Q6PH85 259 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 LGI2Q8N0V4 545 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 CARNMT1Q8N4J0 409 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 IL17RCQ8NAC3 791 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 ZBTB44Q8NCP5 570 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 NT5C3BQ969T7 300 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 TRIM11Q96F44 468 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 TBCBQ99426 244 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHD1-202ENST00000414220 CIPCQ9C0C6 399 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 TKTL2Q9H0I9 626 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 ZNHIT6Q9NWK9 470 aaKnown RBP15.23■□□□□ 0.03
CHD1-202ENST00000414220 TMEM59LQ9UK28 342 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 PLA2G4CQ9UP65 541 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 R4GN57 208 aa15.23■□□□□ 0.03
CHD1-202ENST00000414220 FAM170AA1A519 330 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 SIGLEC16A6NMB1 481 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 K7ESF4 209 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 GFRA2O00451 464 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 TRIM24O15164 1050 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 SERPING1P05155 500 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 POLR2EP19388 210 aaKnown RBP15.22■□□□□ 0.03
CHD1-202ENST00000414220 SLC6A4P31645 630 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 CXCR3P49682 368 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 PITX1P78337 314 aaPredicted RBP15.22■□□□□ 0.03
CHD1-202ENST00000414220 BYSLQ13895 437 aaKnown RBP15.22■□□□□ 0.03
CHD1-202ENST00000414220 STARD3Q14849 445 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 CRY1Q16526 586 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 EMC10Q5UCC4 262 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 HEATR6Q6AI08 1181 aaKnown RBP15.22■□□□□ 0.03
CHD1-202ENST00000414220 PKN3Q6P5Z2 889 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 PHLDB2Q86SQ0 1253 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 WDR5BQ86VZ2 330 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 FIBINQ8TAL6 211 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 RXFP2Q8WXD0 754 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 NELL1Q92832 810 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms