RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CTRB1P17538 263 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TNFRSF1AP19438 455 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TYMPP19971 482 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CCNA2P20248 432 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CASTP20810 708 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TBXAS1P24557 533 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PTBP1P26599 531 aaKnown RBP eCLIP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 AKT1P31749 480 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 IL13P35225 146 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 THPOP40225 353 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NNMTP40261 264 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PIK3CBP42338 1070 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 POU3F4P49335 361 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NEK4P51957 841 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 THOP1P52888 689 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PPP5CP53041 499 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CASP6P55212 293 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ADARP55265 1226 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF445P59923 1031 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TSPAN5P62079 268 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 VAMP2P63027 116 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TPM4P67936 248 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 RNF4P78317 190 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CYP4F2P78329 520 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 S100A12P80511 92 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ROR2Q01974 943 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 DSC2Q02487 901 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 DDR1Q08345 913 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CYP4F3Q08477 520 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 DNAJC3Q13217 504 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 EFR3AQ14156 821 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CASP8Q14790 479 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 GPR162Q16538 588 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TSTQ16762 297 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM61Q5EBN2 209 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CFAP157Q5JU67 520 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 HABP4Q5JVS0 413 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 LIN9Q5TKA1 542 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CWF19L1Q69YN2 538 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 IQSEC1Q6DN90 963 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CTRB2Q6GPI1 263 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 RCSD1Q6JBY9 416 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PGM2L1Q6PCE3 622 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 DARS2Q6PI48 645 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM65Q6PJ69 517 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SLC2A7Q6PXP3 512 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 KDM7AQ6ZMT4 941 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 RNF111Q6ZNA4 994 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CATSPERGQ6ZRH7 1159 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CACNA2D4Q7Z3S7 1137 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 RABEPKQ7Z6M1 372 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SPPL2CQ8IUH8 684 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 UNC5CLQ8IV45 518 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC105Q8IYK2 499 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TXLNBQ8N3L3 684 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 GALNT15Q8N3T1 639 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 FBXW8Q8N3Y1 598 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TTLL6Q8N841 843 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 C19orf47Q8N9M1 422 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC63Q8NA47 563 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 IQUBQ8NA54 791 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF527Q8NB42 609 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 FANCBQ8NB91 859 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 DAGLBQ8NCG7 672 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 Q8NFD4 153 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 OR2W6PQ8NHA6 318 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CLHC1Q8NHS4 586 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF671Q8TAW3 534 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 MAIP1Q8WWC4 291 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 HDAC10Q969S8 669 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF764Q96H86 408 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PDLIM5Q96HC4 596 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZBED3Q96IU2 234 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 MAP6Q96JE9 813 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 RPGRIP1Q96KN7 1286 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 IFT74Q96LB3 600 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CEP19Q96LK0 163 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 FAM20AQ96MK3 541 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF560Q96MR9 790 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SLC6A18Q96N87 628 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NOX5Q96PH1 765 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SORCS2Q96PQ0 1159 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ALS2CR12Q96Q35 445 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 FERD3LQ96RJ6 166 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 OSBPL9Q96SU4 736 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CDK5RAP1Q96SZ6 601 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PDCD2LQ9BRP1 358 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NUP85Q9BW27 656 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 STK33Q9BYT3 514 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 UNKQ9C0B0 810 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NUP62CLQ9H1M0 184 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 WDR26Q9H7D7 661 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SPACA1Q9HBV2 294 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 MRM3Q9HC36 420 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM39Q9HCM9 518 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SARS2Q9NP81 518 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 C8orf4Q9NR00 106 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 BATF3Q9NR55 127 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms