RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FAM209BQ5JX69 171 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 DENND2CQ68D51 928 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 SV2BQ7L1I2 683 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 NIPA1Q7RTP0 329 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 FGD2Q7Z6J4 655 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 PLEKHH3Q7Z736 793 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 GPBP1Q86WP2 473 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 CCDC60Q8IWA6 550 aaPredicted RBP9.71□□□□□ -0.86
SNHG3-201ENST00000413987 SLC7A5P1Q8MH63 180 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 ANKRD53Q8N9V6 530 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 GALNT6Q8NCL4 622 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 SHCBP1Q8NEM2 672 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 ERMNQ8TAM6 284 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 GDAP1Q8TB36 358 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 RNF139Q8WU17 664 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 DTNBP1Q96EV8 351 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 TSG101Q99816 390 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 TMEM109Q9BVC6 243 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 SORBS1Q9BX66 1292 aaKnown RBP9.71□□□□□ -0.86
SNHG3-201ENST00000413987 ARHGEF4Q9NR80 690 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 KRT84Q9NSB2 600 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 PCDHB12Q9Y5F1 795 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 PCDHGB2Q9Y5G2 931 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 ATP8B3O60423 1300 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 K7EPI3 171 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 IRAK2O43187 625 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ADCY6O43306 1168 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SUSD5O60279 629 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ATP5HO75947 161 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 OAS1P00973 400 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PAMP19021 973 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 CYP2B6P20813 491 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 NOS3P29474 1203 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ALDH3A1P30838 453 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 HOXA11P31270 313 aaPredicted RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SOX6P35712 828 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PEX5P50542 639 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SLC12A3P55017 1021 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 CD83Q01151 205 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ERV3-1Q14264 604 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 HSDL1Q3SXM5 330 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 TBCELQ5QJ74 424 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ARHGAP11AQ6P4F7 1023 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ASRGL1Q7L266 308 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SYCE1Q8N0S2 351 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 CFAP61Q8NHU2 1237 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SLC7A14Q8TBB6 771 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 TEKT4Q8WW24 435 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 HTRA1Q92743 480 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 MAGEH1Q9H213 219 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 VCXQ9H320 206 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PABPC3Q9H361 631 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 RXFP1Q9HBX9 757 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ADAM22Q9P0K1 906 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PACSIN2Q9UNF0 486 aaPredicted RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ARL2BPQ9Y2Y0 163 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 NOC2LQ9Y3T9 749 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 KDM3AQ9Y4C1 1321 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PVALEFA0A1B0GWK0 134 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 TRPA1O75762 1119 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 GGPS1O95749 300 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 HEXBP07686 556 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SNRNP70P08621 437 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 KRT16P08779 473 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 C6orf222P0C671 652 aaPredicted RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 CYP11B2P19099 503 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ANXA13P27216 316 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 VEGFBP49765 207 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PMS2P54278 862 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 NPEPPSP55786 919 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ACTR2P61160 394 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 COG7P83436 770 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 CLCQ05315 142 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 AUHQ13825 339 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 IKBIPQ70UQ0 350 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 KRT78Q8N1N4 520 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 GUF1Q8N442 669 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 FAM13CQ8NE31 585 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 KRT35Q92764 455 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 MAML3Q96JK9 1138 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 CCDC74BQ96LY2 380 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PRMT1Q99873 361 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 ARHGAP9Q9BRR9 750 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SEMA6BQ9H3T3 888 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 SLC9A2Q9UBY0 812 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 STK39Q9UEW8 545 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
SNHG3-201ENST00000413987 BZW2Q9Y6E2 419 aaKnown RBP9.7□□□□□ -0.86
SNHG3-201ENST00000413987 DPPA5A6NC42 116 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ZNF862O60290 1169 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 SMPD2O60906 423 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms