RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 ELOVL2Q9NXB9 296 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 TJP2Q9UDY2 1190 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 LIMA1Q9UHB6 759 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 SLC12A6Q9UHW9 1150 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
MCF2L-211ENST00000413354 STON1Q9Y6Q2 735 aa16.3■□□□□ 0.2
MCF2L-211ENST00000413354 TNRC6BQ9UPQ9 1833 aaKnown RBP16.29■□□□□ 0.2
MCF2L-211ENST00000413354 LGALS16A8MUM7 142 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 TBL1XO60907 577 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 ZNF217O75362 1048 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 DAB1O75553 588 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 MOCS2O96007 188 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-211ENST00000413354 IGLV3-25P01717 112 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 ERBB2P04626 1255 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 GABRG2P18507 467 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 MPLP40238 635 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 PUM1Q14671 1186 aaKnown RBP eCLIP16.29■□□□□ 0.2
MCF2L-211ENST00000413354 RNF43Q68DV7 783 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 RFWD3Q6PCD5 774 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 OLFML1Q6UWY5 402 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 SLC26A9Q7LBE3 791 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 ZNF677Q86XU0 584 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 ATP6V0D2Q8N8Y2 350 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-211ENST00000413354 RMDN1Q96DB5 314 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 BTN2A3PQ96KV6 586 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 VPS45Q9NRW7 570 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 RRN3Q9NYV6 651 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 TMEM63CQ9P1W3 806 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 CALCOCO1Q9P1Z2 691 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 CLEC4EQ9ULY5 219 aa16.29■□□□□ 0.2
MCF2L-211ENST00000413354 MUC22E2RYF6 1773 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 MAP3K13O43283 966 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 ZNF806P0C7X5 589 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 PABPC1P11940 636 aaKnown RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 HLA-FP30511 346 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SLC6A4P31645 630 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SCNN1AP37088 669 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 POLR2FP61218 127 aaKnown RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SLC6A3Q01959 620 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 ENPP2Q13822 863 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 RSPO4Q2I0M5 234 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SPDYCQ5MJ68 293 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SLC36A4Q6YBV0 504 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 LPCAT2Q7L5N7 544 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 CYP2U1Q7Z449 544 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 CHSY1Q86X52 802 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 MFN1Q8IWA4 741 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 DEFB106AQ8N104 65 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 C12orf50Q8NA57 414 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 NETO1Q8TDF5 533 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 EPS8L1Q8TE68 723 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 PCMTD1Q96MG8 357 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SPAG5Q96R06 1193 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 FAM207AQ9NSI2 230 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-211ENST00000413354 ABCB8Q9NUT2 735 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 TMEM51Q9NW97 253 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■■■□□ 17.4
MCF2L-211ENST00000413354 DDIT4Q9NX09 232 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 INVSQ9Y283 1065 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 PI4KAP42356 2102 aa16.28■□□□□ 0.2
MCF2L-211ENST00000413354 GOLGA6L7A0A1B0GV03 622 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ATP5BP06576 529 aaKnown RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ZNF18P17022 549 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 NDUFV2P19404 249 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ABCB4P21439 1286 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 BCKDHBP21953 392 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 CCR1P32246 355 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 DPP6P42658 865 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 IL12RB1P42701 662 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 SGSHP51688 502 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 CREB5Q02930 508 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 CDH18Q13634 790 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ZNF234Q14588 700 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 TAF5Q15542 800 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 MAP7D1Q3KQU3 841 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 AASDHQ4L235 1098 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 MS4A13Q5J8X5 152 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 PLA2G2CQ5R387 149 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 TAF3Q5VWG9 929 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 KIAA1211LQ6NV74 962 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 SERPINA13PQ6UXR4 307 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 CHST9Q7L1S5 443 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ERMP1Q7Z2K6 904 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 ERICH1Q86X53 443 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 NEK11Q8NG66 645 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 RLN3Q8WXF3 142 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 DDX1Q92499 740 aaKnown RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 RNF34Q969K3 372 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 C18orf8Q96DM3 657 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 PRICKLE1Q96MT3 831 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 BPIFA3Q9BQP9 254 aa16.27■□□□□ 0.2
MCF2L-211ENST00000413354 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
MCF2L-211ENST00000413354 CD248Q9HCU0 757 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms