RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 DNAJB3Q8WWF6 145 aa14.24□□□□□ -0.13
NUB1-201ENST00000413040 RTP4Q96DX8 246 aa14.24□□□□□ -0.13
NUB1-201ENST00000413040 FERMT1Q9BQL6 677 aa14.24□□□□□ -0.13
NUB1-201ENST00000413040 KCNK4Q9NYG8 393 aa14.24□□□□□ -0.13
NUB1-201ENST00000413040 A0A0A0MRY4 1105 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 TBX10O75333 385 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 GCATO75600 419 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 LUC7L3O95232 432 aaKnown RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 GCKP35557 465 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 DCAF4L1Q3SXM0 396 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 MARCH8Q5T0T0 291 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 C6orf163Q5TEZ5 329 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 NOTUMQ6P988 496 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 CTU1Q7Z7A3 348 aaKnown RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 CMC1Q7Z7K0 106 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 HIPK4Q8NE63 616 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 LENG1Q96BZ8 264 aaPredicted RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 MTBPQ96DY7 904 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 SPATA13Q96N96 652 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 CYP4F11Q9HBI6 524 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 NMRK1Q9NWW6 199 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 GJD2Q9UKL4 321 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 LOC100653049A0A140TA62 436 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 FAM159BA6NKW6 160 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 KRT34O76011 436 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 LMNAP02545 664 aaKnown RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 SMPD1P17405 629 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 SERPINB9P50453 376 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 EPHB1P54762 984 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 NT5DC4Q86YG4 428 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 SNX27Q96L92 541 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 YIPF3Q9GZM5 350 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 ACSS2Q9NR19 701 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 ARHGEF4Q9NR80 690 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 SYBUQ9NX95 663 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 UBQLN1Q9UMX0 589 aaKnown RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 TIMM13Q9Y5L4 95 aaPredicted RBP14.23□□□□□ -0.13
NUB1-201ENST00000413040 WASF2Q9Y6W5 498 aa14.23□□□□□ -0.13
NUB1-201ENST00000413040 CIB2O75838 187 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 PSMG1O95456 288 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 RARBP10826 455 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 NCF2P19878 526 aaPredicted RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 PTPN9P43378 593 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 OCRLQ01968 901 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 C1orf146Q5VVC0 180 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 RASSF3Q86WH2 238 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.22□□□□□ -0.13
NUB1-201ENST00000413040 SIX6OS1Q8N1H7 587 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 RNF139Q8WU17 664 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 CCDC124Q96CT7 223 aaKnown RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 C7orf26Q96N11 449 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 QKIQ96PU8 341 aaKnown RBP eCLIP14.22□□□□□ -0.13
NUB1-201ENST00000413040 XPNPEP3Q9NQH7 507 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 UBP1Q9NZI7 540 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 G3BP2Q9UN86 482 aaKnown RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 HBS1LQ9Y450 684 aaKnown RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 SMIM28A0A1B0GU29 152 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 GOLGA8TH3BQL2 631 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 NR2C2P49116 596 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 DEUP1Q05D60 604 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 DGKDQ16760 1214 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 HSF5Q4G112 596 aaPredicted RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 PACS1Q6VY07 963 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 OR52K1Q8NGK4 314 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 SLC7A14Q8TBB6 771 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 SCG3Q8WXD2 468 aaKnown RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 AZIN2Q96A70 460 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 ZNF669Q96BR6 464 aaPredicted RBP14.22□□□□□ -0.13
NUB1-201ENST00000413040 PPP1R36Q96LQ0 422 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 VTA1Q9NP79 307 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 SIRPGQ9P1W8 387 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 KCNH4Q9UQ05 1017 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 NUP205Q92621 2012 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 DNAJC6O75061 913 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 BEST1O76090 585 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 TPSB2P20231 275 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 CRHR1P34998 444 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 GJA5P36382 358 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 VHLP40337 213 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 MAP3K7CLP57077 242 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 TPSAB1Q15661 275 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 VWA5B1Q5TIE3 1220 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 UNC93AQ86WB7 457 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 ZDHHC17Q8IUH5 632 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 TNS4Q8IZW8 715 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 TLE6Q9H808 572 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 DONSONQ9NYP3 566 aa14.22□□□□□ -0.13
NUB1-201ENST00000413040 PTPRFP10586 1907 aa14.21□□□□□ -0.13
NUB1-201ENST00000413040 PDHXO00330 501 aa14.21□□□□□ -0.13
NUB1-201ENST00000413040 SNAI1O95863 264 aaPredicted RBP14.21□□□□□ -0.13
NUB1-201ENST00000413040 MMP3P08254 477 aa14.21□□□□□ -0.13
NUB1-201ENST00000413040 C6orf222P0C671 652 aaPredicted RBP14.21□□□□□ -0.13
NUB1-201ENST00000413040 TAF6P49848 677 aa14.21□□□□□ -0.13
NUB1-201ENST00000413040 SLC25A3Q00325 362 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms