RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 GRIA1P42261 906 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 MAGEA6P43360 314 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 MLLT6P55198 1093 aaPredicted RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 PSMD5Q16401 504 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 PKN2Q16513 984 aaKnown RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 USP41Q3LFD5 358 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 MGAT5BQ3V5L5 792 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 HSP90B2PQ58FF3 399 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 EFHC2Q5JST6 749 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 MSANTD2Q6P1R3 559 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 OTOP2Q7RTS6 562 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 PPIL6Q8IXY8 311 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 COLGALT1Q8NBJ5 622 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 CCHCR1Q8TD31 782 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 EPS8L3Q8TE67 593 aaKnown RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 WBP2Q969T9 261 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 MYEOVQ96EZ4 313 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 SPATA17Q96L03 361 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 RBM15Q96T37 977 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 SEPT5Q99719 369 aaPredicted RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 GORASP1Q9BQQ3 440 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 FOXP3Q9BZS1 431 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 SIK2Q9H0K1 926 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 PLAC1Q9HBJ0 212 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 NDFIP2Q9NV92 336 aa8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 CXXC1Q9P0U4 656 aaPredicted RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 NOVA2Q9UNW9 492 aaKnown RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.91□□□□□ -0.98
HMGN1P34-201ENST00000413023 CLUHO75153 1309 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 GOLGA6L7A0A1B0GV03 622 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 TLDC2A0PJX2 215 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 F5H423 210 aaPredicted RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 C1QAP02745 245 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SRGAP2BP0DMP2 458 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 HSPA1AP0DMV8 641 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 HSPA1BP0DMV9 641 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 CREB1P16220 341 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 DESP17661 470 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SLCO1A2P46721 670 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 AIF1P55008 147 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 TPI1P60174 286 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 DSG1Q02413 1049 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 GABPB1Q06547 395 aaPredicted RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 EFEMP1Q12805 493 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 PDIA2Q13087 525 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 GPS2Q13227 327 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 BTG3Q14201 252 aaPredicted RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 LONRF1Q17RB8 773 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SKIDA1Q1XH10 827 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ANKRD20A2Q5SQ80 823 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ANKRD20A1Q5TYW2 823 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 AGBL2Q5U5Z8 902 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 PIK3R6Q5UE93 754 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ANKRD20A3Q5VUR7 823 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 DENND2CQ68D51 928 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ARHGAP36Q6ZRI8 547 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 DENND5BQ6ZUT9 1274 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ZNF534Q76KX8 674 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 DDX53Q86TM3 631 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 CAND1Q86VP6 1230 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ANKMY2Q8IV38 441 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 CDKL3Q8IVW4 592 aaPredicted RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ARHGAP12Q8IWW6 846 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SPPL2BQ8TCT7 592 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 TFB1MQ8WVM0 346 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 HTR3CQ8WXA8 447 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 BADQ92934 168 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 RNF34Q969K3 372 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 P2RY11Q96G91 374 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 ZNF558Q96NG5 402 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 HAPLN3Q96S86 360 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 HERC2P3Q9BVR0 1158 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 TTLL2Q9BWV7 592 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 CEP41Q9BYV8 373 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SLC39A8Q9C0K1 460 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 FBXO44Q9H4M3 255 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 NOL6Q9H6R4 1146 aaKnown RBP8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 CCSER2Q9H7U1 834 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 PRDM16Q9HAZ2 1276 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 IL23AQ9NPF7 189 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 RAB6BQ9NRW1 208 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 COMMD8Q9NX08 183 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SPG21Q9NZD8 308 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 SHOC2Q9UQ13 582 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 HS3ST4Q9Y661 456 aa8.9□□□□□ -0.98
HMGN1P34-201ENST00000413023 PTPRDP23468 1912 aa8.9□□□□□ -0.99
HMGN1P34-201ENST00000413023 FNDC1Q4ZHG4 1894 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CFAP69A5D8W1 941 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 GOLGA6CA6NDK9 693 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 SMIM23A6NLE4 172 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 HACD1B0YJ81 288 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 TCEA3O75764 348 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 PIAS1O75925 651 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 GJB5O95377 273 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 SOD2P04179 222 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 MYZAPP0CAP1 466 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 GOLGA6DP0CG33 693 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms