RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 KREMEN2Q8NCW0 462 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 OR6K2Q8NGY2 324 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 RAD9AQ99638 391 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ERP44Q9BS26 406 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PRDM12Q9H4Q4 367 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 YBX2Q9Y2T7 364 aaKnown RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 TNRC18O15417 2968 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 INPPL1O15357 1258 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 LIASO43766 372 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 DAB1O75553 588 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 SMAD3P84022 425 aaKnown RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 BOLA3Q53S33 107 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 ALFQ53S48 1182 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 FAF2Q96CS3 445 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 ZFYVE19Q96K21 471 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 NPY6RQ99463 290 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 FMO2Q99518 471 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 SEMA4AQ9H3S1 761 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 VPS37BQ9H9H4 285 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 PPANQ9NQ55 473 aaKnown RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 AAASQ9NRG9 546 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 KLHL8Q9P2G9 620 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 A8MX80 341 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 FSCN2O14926 492 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 JCHAINP01591 159 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 HAPLN1P10915 354 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 CHRNA3P32297 505 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 ATP1A2P50993 1020 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 SAYSD1Q9NPB0 183 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 TLR8Q9NR97 1041 aaKnown RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 DDX56Q9NY93 547 aaKnown RBP10.04□□□□□ -0.8
SMPD4-203ENST00000412570 TRPM5Q9NZQ8 1165 aa10.04□□□□□ -0.8
SMPD4-203ENST00000412570 OR6C75A6NL08 312 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 GOLGA8KD6RF30 607 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 POC1B-GALNT4F8VUJ3 575 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 GOLGA8TH3BQL2 631 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 BUD23O43709 281 aaKnown RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 MCCD1P59942 119 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CHRDL2Q6WN34 429 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 RFX8Q6ZV50 586 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 ATL2Q8NHH9 583 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CFAP36Q96G28 342 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 ATXN7L3BQ96GX2 97 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 PKMYT1Q99640 499 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 TLR9Q9NR96 1032 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 C3orf70A6NLC5 250 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CCDC188H7C350 402 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 TNFRSF10BO14763 440 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 APOEP02649 317 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 PIRTP0C851 137 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CCR1P32246 355 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 ABCG1P45844 678 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 GPM6BQ13491 265 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 POM121L1PQ3SYA9 428 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 BEND6Q5SZJ8 279 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 HEATR6Q6AI08 1181 aaKnown RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 BHLHA9Q7RTU4 235 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 POLNQ7Z5Q5 900 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 ZBED8Q8IZ13 594 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CRIPAKQ8N1N5 446 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 SPPL2BQ8TCT7 592 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 WDR6Q9NNW5 1121 aaKnown RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 MAN1C1Q9NR34 630 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 MTMR10Q9NXD2 777 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 VPS18Q9P253 973 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 MTRRQ9UBK8 725 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 INSL5Q9Y5Q6 135 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 USP34Q70CQ2 3546 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 TRIM66O15016 1216 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 TRIM24O15164 1050 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 COCHO43405 550 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 EPHB3P54753 998 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 RPL10AP62906 217 aaKnown RBP10.03□□□□□ -0.8
SMPD4-203ENST00000412570 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 PPM1LQ5SGD2 360 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CFAP58Q5T655 872 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 MON1AQ86VX9 555 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CARNMT1Q8N4J0 409 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 TUBB2BQ9BVA1 445 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 FZD10Q9ULW2 581 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CHMP2BQ9UQN3 213 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 CCL26Q9Y258 94 aa10.03□□□□□ -0.8
SMPD4-203ENST00000412570 VWA8A3KMH1 1905 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 PMPCBO75439 489 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 FBXO21O94952 628 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 GLUD1P00367 558 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 SHBGP04278 402 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.8
SMPD4-203ENST00000412570 GLDCP23378 1020 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 GBP1P32455 592 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 RPL22P35268 128 aaKnown RBP10.02□□□□□ -0.8
SMPD4-203ENST00000412570 SGSHP51688 502 aa10.02□□□□□ -0.8
SMPD4-203ENST00000412570 HADHBP55084 474 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms