RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 NME3Q13232 169 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 CCDC14Q49A88 953 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 FBXO43Q4G163 708 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 MPPE1Q53F39 396 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 RAB6CQ53S08 254 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 TDRD12Q587J7 1177 aaKnown RBP13.66□□□□□ -0.22
HDAC8-210ENST00000412342 MS4A13Q5J8X5 152 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 ARTNQ5T4W7 220 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 PLEKHA7Q6IQ23 1121 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 PPP1R2P3Q6NXS1 205 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 C1orf210Q8IVY1 113 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 RXFP2Q8WXD0 754 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 CENPIQ92674 756 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-210ENST00000412342 BTN2A3PQ96KV6 586 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 XPO6Q96QU8 1125 aaKnown RBP13.66□□□□□ -0.22
HDAC8-210ENST00000412342 PRRX2Q99811 253 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 TRIM5Q9C035 493 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 RAB6CQ9H0N0 254 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 ABHD10Q9NUJ1 306 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 DNAJC17Q9NVM6 304 aaKnown RBP13.66□□□□□ -0.22
HDAC8-210ENST00000412342 ARHGEF38Q9NXL2 777 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 COX16Q9P0S2 106 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 SLC27A6Q9Y2P4 619 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 HCN4Q9Y3Q4 1203 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 A0A087X0T9 212 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 PRRT4C9JH25 899 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 RTN2O75298 545 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 PAPSS2O95340 614 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 ADCY5O95622 1261 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 APODP05090 189 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 FAM228BP0C875 321 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 SLC2A3P11169 496 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 KRT3P12035 628 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 KIR2DL1P43626 348 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 SATB1Q01826 763 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 ANGPT1Q15389 498 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 BRMS1LQ5PSV4 323 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 MPP7Q5T2T1 576 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 RAP1GAP2Q684P5 730 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 GRAMD4Q6IC98 578 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 DNAJC24Q6P3W2 148 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 WFDC5Q8TCV5 224 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 USP33Q8TEY7 942 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 DDI1Q8WTU0 396 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 MRFAP1L1Q96HT8 127 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 ADAMTS1Q9UHI8 967 aa13.65□□□□□ -0.22
HDAC8-210ENST00000412342 ARIH1Q9Y4X5 557 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
HDAC8-210ENST00000412342 DOCK4Q8N1I0 1966 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 K7ESF4 209 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 ATMINO43313 823 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 PAGE1O75459 146 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 F9P00740 461 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 FTLP02792 175 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 CYBBP04839 570 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 PDGFRAP16234 1089 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 TACR2P21452 398 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 HOXC13P31276 330 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 SDC4P31431 198 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 RDXP35241 583 aaKnown RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 TNFRSF4P43489 277 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 DGKGP49619 791 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 ADKP55263 362 aaKnown RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 HDAC4P56524 1084 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 RPS24P62847 133 aaKnown RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 OGDHQ02218 1023 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 DEUP1Q05D60 604 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 GEN1Q17RS7 908 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 STRADAQ7RTN6 431 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 TMC6Q7Z403 805 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 KIAA0907Q7Z7F0 614 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 ZNF683Q8IZ20 524 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 ATP6V0D2Q8N8Y2 350 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 HJURPQ8NCD3 748 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 NELL1Q92832 810 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 TMA16Q96EY4 203 aaKnown RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 MCEEQ96PE7 176 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 DDX50Q9BQ39 737 aaKnown RBP13.64□□□□□ -0.23
HDAC8-210ENST00000412342 SLC2A11Q9BYW1 496 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 TKTL2Q9H0I9 626 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 TMPRSS4Q9NRS4 437 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 FBXO4Q9UKT5 387 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 HS3ST4Q9Y661 456 aa13.64□□□□□ -0.23
HDAC8-210ENST00000412342 CCP110O43303 1012 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms