RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 BEND5Q7L4P6 421 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 SDR16C5Q8N3Y7 309 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 CCDC33Q8N5R6 958 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 POF1BQ8WVV4 589 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 KIAA1191Q96A73 305 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMEM41AQ96HV5 264 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 HERPUD2Q9BSE4 406 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 CRB3Q9BUF7 120 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 SF3B5Q9BWJ5 86 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 EIF2AQ9BY44 585 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 RBM38Q9H0Z9 239 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 PPCSQ9HAB8 311 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 GBA2Q9HCG7 927 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 A1CFQ9NQ94 594 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 GAR1Q9NY12 217 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 MYO1AQ9UBC5 1043 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 PCDHA7Q9UN72 937 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 USP22Q9UPT9 525 aa2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 DRG1Q9Y295 367 aaKnown RBP2.85□□□□□ -1.95
HMGB3P2-201ENST00000411913 NCOA2Q15596 1464 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 A0A087WV62 115 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 C2CD4BA6NLJ0 364 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 CLCA1A8K7I4 914 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PYCARD-AS1I3L0S3 204 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 HNRNPDLO14979 420 aaKnown RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 AREL1O15033 823 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 THAP12O43422 761 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMPRSS11DO60235 418 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 EPN2O95208 641 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PAPSS2O95340 614 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PLGP00747 810 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 MT-ND5P03915 603 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 TXNP10599 105 aaKnown RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 ATF7P17544 494 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 FGFR2P21802 821 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 KLRC1P26715 233 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PRKAR1BP31321 381 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 TECP42680 631 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 HSPA7P48741 367 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 MTHFSP49914 203 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 WNT3P56703 355 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 IRX6P78412 446 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PMS2P11Q13670 270 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 MPEG1Q2M385 716 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 CERCAMQ5T4B2 595 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 KLHDC7AQ5VTJ3 777 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 ANO1Q5XXA6 986 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 NADSYN1Q6IA69 706 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PGBD2Q6P3X8 592 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 FAM57BQ71RH2 274 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 SYTL1Q8IYJ3 562 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 SPARTQ8N0X7 666 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 SLC15A4Q8N697 577 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 DNAJC5GQ8N7S2 189 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 BPIFB1Q8TDL5 484 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 WIPF2Q8TF74 440 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 IPCEF1Q8WWN9 437 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 IQCDQ96DY2 449 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 TRMT61AQ96FX7 289 aaKnown RBP2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 HIC2Q96JB3 615 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 SNX22Q96L94 193 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 MESP1Q9BRJ9 268 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 TTLL2Q9BWV7 592 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 CHST8Q9H2A9 424 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PDCL3Q9H2J4 239 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 CDC23Q9UJX2 597 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 ANAPC4Q9UJX5 808 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 PCDHGB2Q9Y5G2 931 aa2.84□□□□□ -1.95
HMGB3P2-201ENST00000411913 RUSC2Q8N2Y8 1516 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 KDM5BQ9UGL1 1544 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 hCG_1642624A0A1W2PR95 340 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 FSD2A1L4K1 749 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZNF814B7Z6K7 855 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 PLA2G6O60733 806 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 USP12O75317 370 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 PLAUP00749 431 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 HSP90AA1P07900 732 aaKnown RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 HARSP12081 509 aaKnown RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 HOXB2P14652 356 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 IL1R1P14778 569 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 EEF1GP26641 437 aaKnown RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 HOXA11P31270 313 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 HALP42357 657 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 POLD2P49005 469 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CARSP49589 748 aaKnown RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 TERF1P54274 439 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CFHR3Q02985 330 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 ICA1Q05084 483 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCNIQ14094 377 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 STARD3Q14849 445 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 PDCD2Q16342 344 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 SLC35G1Q2M3R5 365 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 TMEM95Q3KNT9 176 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 HSP90AB4PQ58FF6 505 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 SLC39A5Q6ZMH5 540 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 UNC13DQ70J99 1090 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 RNF44Q7L0R7 432 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 MPP5Q8N3R9 675 aa2.83□□□□□ -1.96
HMGB3P2-201ENST00000411913 NKAPQ8N5F7 415 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms