RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 CHADO15335 359 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 RARAP10276 462 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 CTNNA2P26232 953 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 L1CAMP32004 1257 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 ARSEP51690 589 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 ZNF135P52742 658 aaPredicted RBP15.76■□□□□ 0.11
LSM5-207ENST00000410044 ZP2Q05996 745 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 SEMA3BQ13214 749 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 FAM133BQ5BKY9 247 aaKnown RBP15.76■□□□□ 0.11
LSM5-207ENST00000410044 MS4A13Q5J8X5 152 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 NADSYN1Q6IA69 706 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 BBS7Q8IWZ6 715 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 ZNF683Q8IZ20 524 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 SNRNP25Q9BV90 132 aaKnown RBP15.76■□□□□ 0.11
LSM5-207ENST00000410044 LINC00597Q9H2U6 94 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 GOLPH3Q9H4A6 298 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 KCNK12Q9HB15 430 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 TMPRSS4Q9NRS4 437 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 PCDHA3Q9Y5H8 950 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 HS3ST4Q9Y661 456 aa15.76■□□□□ 0.11
LSM5-207ENST00000410044 MIF4GDA9UHW6 222 aaKnown RBP15.75■□□□□ 0.11
LSM5-207ENST00000410044 PSTPIP1O43586 416 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 SPOPO43791 374 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 PDGFRLQ15198 375 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 DPYSL2Q16555 572 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 EML3Q32P44 896 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 EFHC2Q5JST6 749 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 PIK3R6Q5UE93 754 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 MANEALQ5VSG8 457 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 TXNRD3NBQ6F5E7 133 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 PEX26Q7Z412 305 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 SLC44A3Q8N4M1 653 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 HES6Q96HZ4 224 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 ALS2CR12Q96Q35 445 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 KXD1Q9BQD3 176 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 TRMT61BQ9BVS5 477 aaKnown RBP15.75■□□□□ 0.11
LSM5-207ENST00000410044 RETREG1Q9H6L5 497 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 TRPV5Q9NQA5 729 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 DUS2Q9NX74 493 aaKnown RBP15.75■□□□□ 0.11
LSM5-207ENST00000410044 DDX56Q9NY93 547 aaKnown RBP15.75■□□□□ 0.11
LSM5-207ENST00000410044 OR12D3Q9UGF7 316 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 HYOU1Q9Y4L1 999 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 DOCK4Q8N1I0 1966 aa15.75■□□□□ 0.11
LSM5-207ENST00000410044 C5orf42Q9H799 3197 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 IGLV3-10A0A075B6K4 115 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 GOLGA6L7A0A1B0GV03 622 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 CCDC66A2RUB6 948 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 DRGXA6NNA5 263 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 MOCS2O96007 188 aaPredicted RBP15.74■□□□□ 0.11
LSM5-207ENST00000410044 TACR2P21452 398 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 SP100P23497 879 aaPredicted RBP15.74■□□□□ 0.11
LSM5-207ENST00000410044 SLC6A4P31645 630 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 HTR7P34969 479 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 CTNNA1P35221 906 aaKnown RBP15.74■□□□□ 0.11
LSM5-207ENST00000410044 DEKP35659 375 aaKnown RBP15.74■□□□□ 0.11
LSM5-207ENST00000410044 HCAR3P49019 387 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 PEX5P50542 639 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 AUHQ13825 339 aaKnown RBP15.74■□□□□ 0.11
LSM5-207ENST00000410044 PDK2Q15119 407 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 ATP13A4Q4VNC1 1196 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 MPP7Q5T2T1 576 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 RNF43Q68DV7 783 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 VSIG1Q86XK7 387 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 RSAD2Q8WXG1 361 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 MAGEB5Q9BZ81 275 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 ZWILCHQ9H900 591 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 PPARGC1AQ9UBK2 798 aaKnown RBP15.74■□□□□ 0.11
LSM5-207ENST00000410044 AP4E1Q9UPM8 1137 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 MYOFQ9NZM1 2061 aa15.74■□□□□ 0.11
LSM5-207ENST00000410044 XIRP2A4UGR9 3374 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 ZNF487B1APH4 448 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 ARNTLO00327 626 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 KIF5CO60282 957 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
LSM5-207ENST00000410044 HOXC13P31276 330 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 SSR1P43307 286 aaKnown RBP15.73■□□□□ 0.11
LSM5-207ENST00000410044 IFNAR2P48551 515 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 CA9Q16790 459 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 KCNT1Q5JUK3 1230 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 RAP1GAP2Q684P5 730 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 FBXL22Q6P050 247 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 RHBDF2Q6PJF5 856 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 C14orf80Q86SX3 495 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 YAF2Q8IY57 180 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 KATNAL2Q8IYT4 538 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 IRF7Q92985 503 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 ASIC4Q96FT7 647 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 SIK2Q9H0K1 926 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 SPHK2Q9NRA0 654 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 MARK1Q9P0L2 795 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 RCOR3Q9P2K3 495 aaPredicted RBP15.73■□□□□ 0.11
LSM5-207ENST00000410044 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.73■□□□□ 0.11
LSM5-207ENST00000410044 WNT6Q9Y6F9 365 aa15.73■□□□□ 0.11
LSM5-207ENST00000410044 TCF20Q9UGU0 1960 aaKnown RBP15.73■□□□□ 0.11
LSM5-207ENST00000410044 E9PAM4 449 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 F5H5T6 163 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 FAM72CH0Y354 149 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 DDX3YO15523 660 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms