RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 MPPE1Q53F39 396 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 Q6ZS52 159 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 SYNPOQ8N3V7 929 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 ATP6V0D2Q8N8Y2 350 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 TC2NQ8N9U0 490 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 CENPIQ92674 756 aaPredicted RBP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 EXOC4Q96A65 974 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 PRICKLE1Q96MT3 831 aaPredicted RBP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 PRMT1Q99873 361 aaKnown RBP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 ARHGEF38Q9NXL2 777 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 DEC1Q9P2X7 70 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 AKR1B15C9JRZ8 316 aaPredicted RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 ATMINO43313 823 aaPredicted RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 KAT7O95251 611 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 ADCY5O95622 1261 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 F9P00740 461 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 HOXD9P28356 352 aaPredicted RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 KDSRQ06136 332 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 C15orf59Q2T9L4 293 aaPredicted RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 MS4A13Q5J8X5 152 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 SH3PXD2AQ5TCZ1 1133 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 VPS36Q86VN1 386 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 CNGA4Q8IV77 575 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 TMA16Q96EY4 203 aaKnown RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 XPO6Q96QU8 1125 aaKnown RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 CHP1Q99653 195 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 ARHGEF4Q9NR80 690 aa23.19■■□□□ 1.3
PTCD3-203ENST00000409783 DNAJC17Q9NVM6 304 aaKnown RBP23.19■■□□□ 1.3
PTCD3-203ENST00000409783 SSU72P8A0A1W2PR75 194 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 GALR2O43603 387 aaPredicted RBP23.18■■□□□ 1.3
PTCD3-203ENST00000409783 CYBBP04839 570 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 SDC4P31431 198 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 GRIA2P42262 883 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 ATP11AP98196 1134 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 OGDHQ02218 1023 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 MTAPQ13126 283 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 BRMS1LQ5PSV4 323 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 RAP1GAP2Q684P5 730 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 PKN3Q6P5Z2 889 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 MAMSTRQ6ZN01 415 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 TERB1Q8NA31 727 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 DDI1Q8WTU0 396 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 RNF34Q969K3 372 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 MCEEQ96PE7 176 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 DDX50Q9BQ39 737 aaKnown RBP23.18■■□□□ 1.3
PTCD3-203ENST00000409783 TMEM51Q9NW97 253 aa23.18■■□□□ 1.3
PTCD3-203ENST00000409783 CNOT8Q9UFF9 292 aaKnown RBP23.18■■□□□ 1.3
PTCD3-203ENST00000409783 MYO18AQ92614 2054 aaKnown RBP23.17■■□□□ 1.3
PTCD3-203ENST00000409783 PAGE1O75459 146 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 APODP05090 189 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 ABCB4P21439 1286 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 TACR2P21452 398 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 GPD1P21695 349 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 RDXP35241 583 aaKnown RBP23.17■■□□□ 1.3
PTCD3-203ENST00000409783 FBXO43Q4G163 708 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 MPP7Q5T2T1 576 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 ARTNQ5T4W7 220 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 GRAMD4Q6IC98 578 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 ALKBH5Q6P6C2 394 aaKnown RBP23.17■■□□□ 1.3
PTCD3-203ENST00000409783 STRADAQ7RTN6 431 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 ZNF653Q96CK0 615 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 IER2Q9BTL4 223 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 TKTL2Q9H0I9 626 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 WDCPQ9H6R7 721 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 TMPRSS4Q9NRS4 437 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 PARVAQ9NVD7 372 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 SLC12A6Q9UHW9 1150 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 SLC27A6Q9Y2P4 619 aa23.17■■□□□ 1.3
PTCD3-203ENST00000409783 RNF40O75150 1001 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 MYBL1P10243 752 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 DGKGP49619 791 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 ZNF143P52747 638 aaPredicted RBP23.16■■□□□ 1.3
PTCD3-203ENST00000409783 HDAC4P56524 1084 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 RPS24P62847 133 aaKnown RBP23.16■■□□□ 1.3
PTCD3-203ENST00000409783 GFPT1Q06210 699 aaPredicted RBP23.16■■□□□ 1.3
PTCD3-203ENST00000409783 SLC18A3Q16572 532 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 TSR1Q2NL82 804 aaKnown RBP23.16■■□□□ 1.3
PTCD3-203ENST00000409783 CHSY1Q86X52 802 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 FAM131BQ86XD5 332 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 MAML2Q8IZL2 1156 aaPredicted RBP23.16■■□□□ 1.3
PTCD3-203ENST00000409783 PRSS33Q8NF86 280 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 TRIM11Q96F44 468 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 SLC2A11Q9BYW1 496 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 ZNHIT6Q9NWK9 470 aaKnown RBP23.16■■□□□ 1.3
PTCD3-203ENST00000409783 C2orf42Q9NWW7 574 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 HCN2Q9UL51 889 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 HS3ST4Q9Y661 456 aa23.16■■□□□ 1.3
PTCD3-203ENST00000409783 TMEM191CA6NGB0 347 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 CCP110O43303 1012 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 TBL1XO60907 577 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 TNFRSF4P43489 277 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 KIR2DL1P43626 348 aaPredicted RBP23.15■■□□□ 1.3
PTCD3-203ENST00000409783 MTA1Q13330 715 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 CDO1Q16878 200 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 CCDC122Q5T0U0 273 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 SND1Q7KZF4 910 aaKnown RBP eCLIP23.15■■□□□ 1.3
PTCD3-203ENST00000409783 C1orf210Q8IVY1 113 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 LGI2Q8N0V4 545 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms