RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 C1QL4Q86Z23 238 aa6.8□□□□□ -1.32
LSM5-203ENST00000409782 MB21D2Q8IYB1 491 aaPredicted RBP6.8□□□□□ -1.32
LSM5-203ENST00000409782 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
LSM5-203ENST00000409782 KATNBL1Q9H079 304 aa6.8□□□□□ -1.32
LSM5-203ENST00000409782 UPF3AQ9H1J1 476 aaKnown RBP6.8□□□□□ -1.32
LSM5-203ENST00000409782 PRO3102Q9H379 93 aa6.8□□□□□ -1.32
LSM5-203ENST00000409782 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.8□□□□□ -1.32
LSM5-203ENST00000409782 ADD3Q9UEY8 706 aaKnown RBP6.8□□□□□ -1.32
LSM5-203ENST00000409782 MAGEL2Q9UJ55 1249 aa6.8□□□□□ -1.32
LSM5-203ENST00000409782 RANBP2P49792 3224 aaKnown RBP6.8□□□□□ -1.32
LSM5-203ENST00000409782 A0A087WWL8 130 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 PODXLO00592 558 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 IFIT3O14879 490 aaKnown RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 INMTO95050 263 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 PYGLP06737 847 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 TXNP10599 105 aaKnown RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 HDCP19113 662 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 GABRB3P28472 473 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 KIR2DL3P43628 341 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 MXRA7P84157 204 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 TRAF1Q13077 416 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 BAATQ14032 418 aaPredicted RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 WTAPQ15007 396 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 GAGE13Q4V321 117 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 JMJD6Q6NYC1 403 aaPredicted RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 FBXO38Q6PIJ6 1188 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 RNF207Q6ZRF8 634 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 SEM1Q6ZVN7 128 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 REXO1L1PQ8IX06 675 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 ADGRF4Q8IZF3 695 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 ADGRG2Q8IZP9 1017 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 KYQ8NBH2 561 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 PLA2G15Q8NCC3 412 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 FNIP1Q8TF40 1166 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 GORASP1Q9BQQ3 440 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 MAGEB5Q9BZ81 275 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 LDAHQ9H6V9 325 aa6.79□□□□□ -1.32
LSM5-203ENST00000409782 ZMYND8Q9ULU4 1186 aaPredicted RBP6.79□□□□□ -1.32
LSM5-203ENST00000409782 SMCHD1A6NHR9 2005 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 B4DLN1 442 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 KLRF2D3W0D1 207 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 PYCARD-AS1I3L0S3 204 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 SH2B2O14492 632 aaPredicted RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 DHX16O60231 1041 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 SLC43A1O75387 559 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 PGK1P00558 417 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 IDEP14735 1019 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 KIF5BP33176 963 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 KCNJ5P48544 419 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 COPAP53621 1224 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 RPS6P62753 249 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 GHRHRQ02643 423 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 DUSP2Q05923 314 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 TROAPQ12815 778 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 QRICH1Q2TAL8 776 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 USH1GQ495M9 461 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 TRIM60Q495X7 471 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 UNC13DQ70J99 1090 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 TLK2Q86UE8 772 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 LRRTM4Q86VH4 590 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 FBXO16Q8IX29 292 aaPredicted RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 PCSK9Q8NBP7 692 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 KLHDC9Q8NEP7 349 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 DNERQ8NFT8 737 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 TNPO1Q92973 898 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 SLC7A6OSQ96CW6 309 aaPredicted RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 SNX27Q96L92 541 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 KATNAL1Q9BW62 490 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 SORBS1Q9BX66 1292 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 CHST8Q9H2A9 424 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 CPVLQ9H3G5 476 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 GPR35Q9HC97 309 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 RGL1Q9NZL6 768 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 ZNF212Q9UDV6 495 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 MAD2L2Q9UI95 211 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 CAPN11Q9UMQ6 739 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 MRPL11Q9Y3B7 192 aaKnown RBP6.78□□□□□ -1.32
LSM5-203ENST00000409782 PLEKHM1Q9Y4G2 1056 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 ACTL7AQ9Y615 435 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
LSM5-203ENST00000409782 LTBP2Q14767 1821 aa6.78□□□□□ -1.32
LSM5-203ENST00000409782 ELP1O95163 1332 aa6.77□□□□□ -1.32
LSM5-203ENST00000409782 FAM234BA2RU67 622 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 PRSS29PA6NIE9 313 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 IPO5O00410 1097 aaKnown RBP6.77□□□□□ -1.33
LSM5-203ENST00000409782 ZBTB5O15062 677 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 GRM6O15303 877 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 SNX2O60749 519 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 FAM155BO75949 473 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 BAIAP3O94812 1187 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 JUNP05412 331 aaKnown RBP6.77□□□□□ -1.33
LSM5-203ENST00000409782 FPR1P21462 350 aa6.77□□□□□ -1.33
LSM5-203ENST00000409782 CALML3P27482 149 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms