RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 OVCA2Q8WZ82 227 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 NHEJ1Q9H9Q4 299 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 DNAJC17Q9NVM6 304 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 PTPRBP23467 1997 aa13.34□□□□□ -0.27
CHRNA1-205ENST00000409542 KIAA0391O15091 583 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 KRT86O43790 486 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 ZNF217O75362 1048 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 TNNI1P19237 187 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 RDXP35241 583 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 GRIK2Q13002 908 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 EDRF1Q3B7T1 1238 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 GRAMD4Q6IC98 578 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 KIAA1328Q86T90 577 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 MARCH9Q86YJ5 346 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 CHPFQ8IZ52 775 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 JAKMIP2Q96AA8 810 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC127Q96BQ5 260 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 MRGPRX1Q96LB2 322 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 GABRG3Q99928 467 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 KLF16Q9BXK1 252 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 SDCBP2Q9H190 292 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 XYLT2Q9H1B5 865 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 IL21RQ9HBE5 538 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 CACNA2D2Q9NY47 1150 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 FHOD1Q9Y613 1164 aa13.33□□□□□ -0.28
CHRNA1-205ENST00000409542 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 NEDD8-MDP1E9PL57 170 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 CBFA2T3O75081 653 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 LCA5LO95447 670 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 TYRP14679 529 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 CASP4P49662 377 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 TNNC1P63316 161 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 BNC1Q01954 994 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 CYP24A1Q07973 514 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 SLC14A1Q13336 389 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 HNRNPDQ14103 355 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 PSMD6Q15008 389 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 BRD3Q15059 726 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 SNRNP35Q16560 246 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 HTR3DQ70Z44 454 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 RABEPKQ7Z6M1 372 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 MSANTD4Q8NCY6 345 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 PLEKHO2Q8TD55 490 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 EEF2KMTQ96G04 330 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 SMOQ99835 787 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 NUCKS1Q9H1E3 243 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 KCTD10Q9H3F6 313 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 OSER1Q9NX31 292 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 MYO6Q9UM54 1294 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 GUCA1BQ9UMX6 200 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 PCDHB9Q9Y5E1 797 aa13.32□□□□□ -0.28
CHRNA1-205ENST00000409542 GCN1Q92616 2671 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 CACNG3O60359 315 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 NDUFS2O75306 463 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 TUBBP07437 444 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 VAV2P52735 878 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 ORC1Q13415 861 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 PAPD7Q5XG87 772 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 EPM2AIP1Q7L775 607 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 FUKQ8N0W3 1084 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 BAP1Q92560 729 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 SYN2Q92777 582 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 BHMTQ93088 406 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 PARD6BQ9BYG5 372 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC86Q9H6F5 360 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 PCOLCE2Q9UKZ9 415 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 RAB21Q9UL25 225 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 RAXQ9Y2V3 346 aa13.31□□□□□ -0.28
CHRNA1-205ENST00000409542 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC151A5D8V7 595 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 MDM4O15151 490 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TLR5O60602 858 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 AP1G2O75843 785 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 STAU1O95793 577 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC130P13994 396 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TUBP50607 506 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CYP2J2P51589 502 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 SPA17Q15506 151 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 PREPLQ4J6C6 727 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms