RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SCYL2Q6P3W7 929 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 ZSCAN30Q86W11 494 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 USP13Q92995 863 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 SLC39A13Q96H72 371 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 ADAM33Q9BZ11 813 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 SMG9Q9H0W8 520 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 THG1LQ9NWX6 298 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 SMPD4Q9NXE4 827 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 LSM7Q9UK45 103 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 COMTP21964 271 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 MIPP30301 263 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 MLF2Q15773 248 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 SLFN11Q7Z7L1 901 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 FAM131BQ86XD5 332 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 KIAA1958Q8N8K9 716 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 ATP6V0D2Q8N8Y2 350 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 NTAN1Q96AB6 310 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 ZFRQ96KR1 1074 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 FCRL2Q96LA5 508 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 CALCOCO1Q9P1Z2 691 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 USP18Q9UMW8 372 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 CCL26Q9Y258 94 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 ZNF510Q9Y2H8 683 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
TSPAN4-208ENST00000409531 ARNTLO00327 626 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 STC2O76061 302 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 LATS1O95835 1130 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 HMBSP08397 361 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 KRT7P08729 469 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 AOC1P19801 751 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 SLC11A2P49281 568 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 VCPP55072 806 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 ZC3H12AQ5D1E8 599 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 LRRC38Q5VT99 294 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 CWF19L1Q69YN2 538 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 POLNQ7Z5Q5 900 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 RHOT1Q8IXI2 618 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 ARFGAP1Q8N6T3 406 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 TEKT4Q8WW24 435 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 BTN2A3PQ96KV6 586 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 TKTL2Q9H0I9 626 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 HEBP1Q9NRV9 189 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 PCSK1NQ9UHG2 260 aa17.12■□□□□ 0.33
TSPAN4-208ENST00000409531 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 MIF4GDA9UHW6 222 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 LEFTY2O00292 366 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 PSTPIP1O43586 416 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 PI15O43692 258 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 IRF1P10914 325 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 GLULP15104 373 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 CORO1AP31146 461 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 ADRA1BP35368 520 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 NUBP1P53384 320 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 ATXN1P54253 815 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 MLLT6P55198 1093 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 SCAPQ12770 1279 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 EFHC2Q5JST6 749 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 ZNF569Q5MCW4 686 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 ERMARDQ5T6L9 678 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 HAPLN3Q96S86 360 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 NELL2Q99435 816 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 IRX2Q9BZI1 471 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 KCNH6Q9H252 994 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 CFAP97Q9P2B7 532 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 SIT1Q9Y3P8 196 aa17.11■□□□□ 0.33
TSPAN4-208ENST00000409531 ZNF318Q5VUA4 2279 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 KANSL1LA0AUZ9 987 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 KCNU1A8MYU2 1149 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 MOCS2O96007 188 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 SLC25A11Q02978 314 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 USP4Q13107 963 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 RAB6CQ53S08 254 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 C17orf53Q8N3J3 647 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 UBL4BQ8N7F7 174 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 ZFYVE19Q96K21 471 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 PRRX2Q99811 253 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 DDX50Q9BQ39 737 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 FAM83CQ9BQN1 747 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 RAB6CQ9H0N0 254 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 GOLPH3Q9H4A6 298 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 DDX56Q9NY93 547 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms