RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 POLR1EQ9GZS1 481 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 WWOXQ9NZC7 414 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 NCANO14594 1321 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 PARP6Q2NL67 630 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 TKTL2Q9H0I9 626 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 LRP6O75581 1613 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 ZNF7P17097 686 aaPredicted RBP17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 RFC1P35251 1148 aaPredicted RBP17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 SCNN1BP51168 640 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 ITIH4Q14624 930 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 KCNA10Q16322 511 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 STK40Q8N2I9 435 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 KIF2BQ8N4N8 673 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 TNIP2Q8NFZ5 429 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 RNF217Q8TC41 542 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 ATG4AQ8WYN0 398 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 FAM163BP0C2L3 166 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 TSHRP16473 764 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 CCL23P55773 120 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 SPDYAQ5MJ70 313 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 RRM2BQ7LG56 351 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 SLC22A9Q8IVM8 553 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 TMEM121Q9BTD3 319 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 DUSP16Q9BY84 665 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 H3BMM5 538 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 USP17L7P0C7H9 530 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 CCDC130P13994 396 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 POLR2EP19388 210 aaKnown RBP17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 INPP5AQ14642 412 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 MIIPQ5JXC2 388 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 OLFML2BQ68BL8 750 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 PDPK2PQ6A1A2 396 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 DENND1BQ6P3S1 775 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 RPTORQ8N122 1335 aa17.22■□□□□ 0.35
PCDHA13-202ENST00000409494 TRDMT1O14717 391 aaKnown RBP17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 ZNF862O60290 1169 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 DAB1O75553 588 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 KDELR1P24390 212 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 C9orf57Q5W0N0 161 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 C16orf89Q6UX73 402 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 MPOP05164 745 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 SERPINA4P29622 427 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 BCL2L1Q07817 233 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 AASDHQ4L235 1098 aaPredicted RBP17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 RGS9BPQ6ZS82 235 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 MANSC1Q9H8J5 431 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 SYN3O14994 580 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 KIF1CO43896 1103 aaKnown RBP17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 GLUD2P49448 558 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 MROH9Q5TGP6 573 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 PKN3Q6P5Z2 889 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 HJURPQ8NCD3 748 aaPredicted RBP17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 CXorf56Q9H5V9 222 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 GDF3Q9NR23 364 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 PDE2AO00408 941 aaPredicted RBP17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 EVX2Q03828 476 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 TGM3Q08188 693 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 MFSD7Q6UXD7 560 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 NOD2Q9HC29 1040 aa17.21■□□□□ 0.35
PCDHA13-202ENST00000409494 PFDN1O60925 122 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 PPFIA2O75334 1257 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 FAM153BP0C7A2 387 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 HDCP19113 662 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 DLG4P78352 724 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 FAM153CQ494X1 144 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 LVRNQ6Q4G3 990 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 TEKT4Q8WW24 435 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SLC24A3Q9HC58 644 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 RPN2P04844 631 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 PGAM1P18669 254 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 GRK3P35626 688 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 GP5P40197 560 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SCTRP47872 440 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 NAA20P61599 178 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 MAMLD1Q13495 774 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 HIC1Q14526 733 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 BRI3BPQ8WY22 251 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SMIM28A0A1B0GU29 152 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 PTPN3P26045 913 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 MATKP42679 507 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 CD151P48509 253 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 DNAJC3Q13217 504 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 PDE1CQ14123 709 aaPredicted RBP17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SYCP2LQ5T4T6 812 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 ARMC12Q5T9G4 340 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 GRTP1Q5TC63 336 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 IRGQQ8WZA9 623 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SUSD6Q92537 303 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 MYLPFQ96A32 169 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 NMRK2Q9NPI5 230 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 OR12D3Q9UGF7 316 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 CLCA2Q9UQC9 943 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms