RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MYLK3Q32MK0 819 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 CELF3Q5SZQ8 465 aaKnown RBP15.91■□□□□ 0.14
LIMS2-205ENST00000409455 PDPK2PQ6A1A2 396 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 ISLR2Q6UXK2 745 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 DDI1Q8WTU0 396 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 COPS5Q92905 334 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 CNBD2Q96M20 576 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 CALN1Q9BXU9 219 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 IFT122Q9HBG6 1241 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 MORF4L1Q9UBU8 362 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 APPL1Q9UKG1 709 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 ARHGAP26Q9UNA1 814 aa15.91■□□□□ 0.14
LIMS2-205ENST00000409455 FAM189A1O60320 539 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 UGT1A9O60656 530 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 TXNP10599 105 aaKnown RBP15.9■□□□□ 0.14
LIMS2-205ENST00000409455 MTTPP55157 894 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 HDAC4P56524 1084 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 ZNF792Q3KQV3 632 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 ARMCX2Q7L311 632 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 CATSPER1Q8NEC5 780 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 LRGUKQ96M69 825 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 ZNF778Q96MU6 729 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 UGT1A7Q9HAW7 530 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 UGT1A10Q9HAW8 530 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 UGT1A8Q9HAW9 530 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 BLOC1S6Q9UL45 172 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 AP4B1Q9Y6B7 739 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 LOC100653049A0A140TA62 436 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 ASB14A6NK59 587 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 KRT34O76011 436 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 CRTAMO95727 393 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 CSH1P0DML2 217 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 CSH2P0DML3 217 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 KRT3P12035 628 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 NCF2P19878 526 aaPredicted RBP15.9■□□□□ 0.14
LIMS2-205ENST00000409455 GALK1P51570 392 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 COG7P83436 770 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 MBLAC2Q68D91 279 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 FRMD7Q6ZUT3 714 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 ZNF554Q86TJ5 538 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 DIS3LQ8TF46 1054 aaKnown RBP15.9■□□□□ 0.14
LIMS2-205ENST00000409455 TMEM143Q96AN5 459 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 PRPF18Q99633 342 aaKnown RBP15.9■□□□□ 0.14
LIMS2-205ENST00000409455 GPR20Q99678 358 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 NIFKQ9BYG3 293 aaKnown RBP15.9■□□□□ 0.14
LIMS2-205ENST00000409455 SENP6Q9GZR1 1112 aaPredicted RBP15.9■□□□□ 0.14
LIMS2-205ENST00000409455 DNAJC28Q9NX36 388 aa15.9■□□□□ 0.14
LIMS2-205ENST00000409455 H0YCG3 227 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 ITM2AO43736 263 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 TRMUO75648 421 aaKnown RBP15.89■□□□□ 0.13
LIMS2-205ENST00000409455 SERPINB9P50453 376 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 BORAQ6PGQ7 559 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 LRRC43Q8N309 656 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 EFCAB3Q8N7B9 438 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 HSPH1Q92598 858 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 PARK7Q99497 189 aaKnown RBP15.89■□□□□ 0.13
LIMS2-205ENST00000409455 SMYD2Q9NRG4 433 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 PAK5Q9P286 719 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 PCDHGA4Q9Y5G9 962 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 NOP56O00567 594 aaKnown RBP15.89■□□□□ 0.13
LIMS2-205ENST00000409455 EIF4BP23588 611 aaKnown RBP15.89■□□□□ 0.13
LIMS2-205ENST00000409455 POLR2BP30876 1174 aaKnown RBP15.89■□□□□ 0.13
LIMS2-205ENST00000409455 ABCD1P33897 745 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 GABRB2P47870 512 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 IDH3AP50213 366 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 NR1H2P55055 460 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 EMC2Q15006 297 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 ZNF394Q53GI3 561 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 TEDDM1Q5T9Z0 273 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 TRIM50Q86XT4 487 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 ADGRF2Q8IZF7 708 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 NUP93Q8N1F7 819 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 ARFGAP1Q8N6T3 406 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 SPATA33Q96N06 139 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 POLR3FQ9H1D9 316 aaPredicted RBP15.89■□□□□ 0.13
LIMS2-205ENST00000409455 RSAD1Q9HA92 442 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 NRBP2Q9NSY0 501 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 PCSK1NQ9UHG2 260 aa15.89■□□□□ 0.13
LIMS2-205ENST00000409455 H7C0C1 242 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 TOP3BO95985 862 aaKnown RBP15.88■□□□□ 0.13
LIMS2-205ENST00000409455 FAM58BPP0C7Q3 252 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 ATP5OP48047 213 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 ZNF157P51786 506 aaPredicted RBP15.88■□□□□ 0.13
LIMS2-205ENST00000409455 RPL10AP62906 217 aaKnown RBP15.88■□□□□ 0.13
LIMS2-205ENST00000409455 MYBPC1Q00872 1141 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 PEX6Q13608 980 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 FAM160B1Q5W0V3 765 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 GPR142Q7Z601 462 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 RNF168Q8IYW5 571 aaPredicted RBP15.88■□□□□ 0.13
LIMS2-205ENST00000409455 TFB1MQ8WVM0 346 aaKnown RBP15.88■□□□□ 0.13
LIMS2-205ENST00000409455 PRPF31Q8WWY3 499 aaKnown RBP15.88■□□□□ 0.13
LIMS2-205ENST00000409455 CGRRF1Q99675 332 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 ARHGAP28Q9P2N2 729 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 PCSK6P29122 969 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 HSPA13P48723 471 aa15.88■□□□□ 0.13
LIMS2-205ENST00000409455 EMP3P54852 163 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms