RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 GPNMBQ14956 572 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 BBS9Q3SYG4 887 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CCDC38Q502W7 563 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC39A12Q504Y0 691 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 BRMS1LQ5PSV4 323 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 FNBP1LQ5T0N5 605 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 UBAP2Q5T6F2 1119 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ANKRD22Q5VYY1 191 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 NCBP2-AS2Q69YL0 99 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ARHGEF18Q6ZSZ5 1173 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 RFX8Q6ZV50 586 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 BHLHA9Q7RTU4 235 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ANKRD33Q7Z3H0 272 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 EXOC3L1Q86VI1 746 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MON1AQ86VX9 555 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 PLPP6Q8IY26 295 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ARHGAP18Q8N392 663 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 HTR3CQ8WXA8 447 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 EDEM1Q92611 657 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 RNF34Q969K3 372 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ZDHHC16Q969W1 377 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 LRRC39Q96DD0 335 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 C8orf48Q96LL4 319 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TOX2Q96NM4 488 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CASD1Q96PB1 797 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 OLFM3Q96PB7 478 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DEFB118Q96PH6 123 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 QKIQ96PU8 341 aaKnown RBP eCLIP6.47□□□□□ -1.374e-7■■□□□ 13.7
GTF3C3-202ENST00000409364 TMEM209Q96SK2 561 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 EPAS1Q99814 870 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TMEM175Q9BSA9 504 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MRPL9Q9BYD2 267 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MAGEB5Q9BZ81 275 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 RNF208Q9H0X6 261 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 OSBPL2Q9H1P3 480 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 FBXO44Q9H4M3 255 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ETNK2Q9NVF9 386 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 COX16Q9P0S2 106 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SENP1Q9P0U3 644 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 OR12D3Q9UGF7 316 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ADAM28Q9UKQ2 775 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 PRG3Q9Y2Y8 225 aaPredicted RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 PCDHB5Q9Y5E4 795 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CEP350Q5VT06 3117 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 A0A0A0MRY4 1105 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TCRBV7S3A2A0A539 114 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 F8W810 466 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 H7C4K7 107 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TRDMT1O14717 391 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DCLK1O15075 740 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 B4GALT3O60512 393 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 OPHN1O60890 802 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 APRTP07741 180 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 GSTA2P09210 222 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ERCC2P18074 760 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TPSB2P20231 275 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MX2P20592 715 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SERPINB6P35237 376 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC19A1P41440 591 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 RABGGTBP53611 331 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC5A3P53794 718 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 GEMIN4P57678 1058 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TPI1P60174 286 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 YWHAGP61981 247 aaKnown RBP eCLIP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 FOXK1P85037 733 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DPYSQ14117 519 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TPSAB1Q15661 275 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 PARP6Q2NL67 630 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 KLHL38Q2WGJ6 581 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CTXN3Q4LDR2 81 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 FAM171A1Q5VUB5 890 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TTC19Q6DKK2 380 aaPredicted RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ZNF280DQ6N043 979 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 B4GALNT4Q76KP1 1039 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 NPAS4Q8IUM7 802 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SCN4BQ8IWT1 228 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CCDC13Q8IYE1 715 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 NUP93Q8N1F7 819 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CCNYQ8ND76 341 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 FBXO36Q8NEA4 188 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SCAMP5Q8TAC9 235 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ADAM32Q8TC27 787 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DQX1Q8TE96 717 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MAML1Q92585 1016 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SPATA13Q96N96 652 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 HAPLN3Q96S86 360 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 CYTH2Q99418 400 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 RHOBTB2Q9BYZ6 727 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TKTL2Q9H0I9 626 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 XAB2Q9HCS7 855 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 INTS9Q9NV88 658 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 COMMD8Q9NX08 183 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DNAJB4Q9UDY4 337 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 POC1B-GALNT4F8VUJ3 575 aa6.46□□□□□ -1.38
GTF3C3-202ENST00000409364 NDUFAB1O14561 156 aa6.46□□□□□ -1.38
GTF3C3-202ENST00000409364 PQBP1O60828 265 aaKnown RBP6.46□□□□□ -1.38
GTF3C3-202ENST00000409364 TMEM63AO94886 807 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms