RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TMEM30AQ9NV96 361 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
LSM5-202ENST00000409292 KBTBD4Q9NVX7 518 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 PLK2Q9NYY3 685 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 SUN2Q9UH99 717 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.12□□□□□ -1.11
LSM5-202ENST00000409292 URB1O60287 2271 aaKnown RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 A0A1B0GVT2 93 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PVALEFA0A1B0GWK0 134 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 A0A1W2PQH9 124 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 TYW5A2RUC4 315 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 WASH3PC4AMC7 463 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 IKBKBO14920 756 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 SPTLC2O15270 562 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 YKT6O15498 198 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 CYP26A1O43174 497 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 TGFB1I1O43294 461 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 CUTAO60888 179 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PPP6R2O75170 966 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 STC2O76061 302 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 TBX18O95935 607 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PENKP01210 267 aaPredicted RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 IGLV3-19P01714 112 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 ATP5BP06576 529 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 HMBSP08397 361 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 CISD3P0C7P0 127 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 KRT13P13646 458 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 ABCB4P21439 1286 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 CORO1AP31146 461 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 IL12RB1P42701 662 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 ST8SIA6P61647 398 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 EFEMP1Q12805 493 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 ZNF234Q14588 700 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 SCARA3Q6AZY7 606 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 CNNM4Q6P4Q7 775 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PAQR9Q6ZVX9 377 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 EPM2AIP1Q7L775 607 aaPredicted RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 CCDC186Q7Z3E2 898 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 SLCO6A1Q86UG4 719 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 OR2T3Q8NH03 318 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PARD3BQ8TEW8 1205 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 LRRN4Q8WUT4 740 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 HPS3Q969F9 1004 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 IGSF8Q969P0 613 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PLD4Q96BZ4 506 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 C7orf25Q9BPX7 421 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 ACE2Q9BYF1 805 aaPredicted RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 FGFBP2Q9BYJ0 223 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 SGK2Q9HBY8 427 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 OLA1Q9NTK5 396 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 EXOC1Q9NV70 894 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 FBXO10Q9UK96 956 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 SCML1Q9UN30 329 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 FNDC3AQ9Y2H6 1198 aaKnown RBP8.11□□□□□ -1.11
LSM5-202ENST00000409292 AK5Q9Y6K8 562 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 PCDH15Q96QU1 1955 aa8.11□□□□□ -1.11
LSM5-202ENST00000409292 GOLGA4Q13439 2230 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 MYH10P35580 1976 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 A0A087WV48 116 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 LRRIQ3A6PVS8 624 aaPredicted RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 H3BM21 787 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CALUO43852 315 aaPredicted RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 PCDHGA12O60330 932 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 FSBPO95073 299 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 SEMA4FO95754 770 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 C4BPAP04003 597 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 CAPNS1P04632 268 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 ITGAVP06756 1048 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 C1SP09871 688 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 ATXN1LP0C7T5 689 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 SYT1P21579 422 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CD27P26842 260 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 ARRB1P49407 418 aaPredicted RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 CSNK1EP49674 416 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 PDE4CQ08493 712 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 GEN1Q17RS7 908 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 KIF19Q2TAC6 998 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CEP135Q66GS9 1140 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CLEC20AQ6ZU45 233 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CACUL1Q86Y37 369 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 DENND1CQ8IV53 801 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CPXM2Q8N436 756 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 LSM14AQ8ND56 463 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 HEXIM2Q96MH2 286 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 USP28Q96RU2 1077 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 DDX50Q9BQ39 737 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 MKRN2Q9H000 416 aaKnown RBP8.1□□□□□ -1.11
LSM5-202ENST00000409292 IL21RQ9HBE5 538 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 CD248Q9HCU0 757 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 SLC39A2Q9NP94 309 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 MARCH2Q9P0N8 246 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 NUDT5Q9UKK9 219 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 HCN2Q9UL51 889 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 ANKRD6Q9Y2G4 727 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms