RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CLUHO75153 1309 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 A0A0A0MRY4 1105 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 APRTP07741 180 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 ARPP19P56211 112 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 GPX6P59796 221 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 CBLBQ13191 982 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 EIF4EBP2Q13542 120 aaPredicted RBP19.56■□□□□ 0.72
USP39-202ENST00000409025 ZSCAN26Q16670 478 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 CCDC38Q502W7 563 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 FAM182AQ5T1J6 154 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 CCNYQ8ND76 341 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 SPATA13Q96N96 652 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 OSBPL2Q9H1P3 480 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 ARHGEF38Q9NXL2 777 aa19.56■□□□□ 0.72
USP39-202ENST00000409025 A0A1W2PQH9 124 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 NT5C1B-RDH14C9J2C7 533 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 METTL18O95568 372 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 CPB1P15086 417 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 GPR15P49685 360 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 MNX1P50219 401 aaPredicted RBP19.55■□□□□ 0.72
USP39-202ENST00000409025 PPARDQ03181 441 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 ANKRD20A2Q5SQ80 823 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 ANKRD20A1Q5TYW2 823 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 SDHAF4Q5VUM1 108 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 ANKRD20A3Q5VUR7 823 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 C3orf62Q6ZUJ4 267 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 MON1AQ86VX9 555 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 TDRPQ86YL5 185 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 ARHGAP18Q8N392 663 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 MCUQ8NE86 351 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 CRISPLD2Q9H0B8 497 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 PRDM12Q9H4Q4 367 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 NMUR1Q9HB89 426 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 TBK1Q9UHD2 729 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 FNDC1Q4ZHG4 1894 aaPredicted RBP19.55■□□□□ 0.72
USP39-202ENST00000409025 SRRM3A6NNA2 597 aaPredicted RBP19.55■□□□□ 0.72
USP39-202ENST00000409025 POC1B-GALNT4F8VUJ3 575 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 NCAM2O15394 837 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 TPSB2P20231 275 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 SSTR1P30872 391 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 FDFT1P37268 417 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 ELK3P41970 407 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 SMARCB1Q12824 385 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 TPSAB1Q15661 275 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 ATAD1Q8NBU5 361 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 CASP10Q92851 521 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 P2RY11Q96G91 374 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 WDR83Q9BRX9 315 aaKnown RBP19.55■□□□□ 0.72
USP39-202ENST00000409025 OXCT2Q9BYC2 517 aaPredicted RBP19.55■□□□□ 0.72
USP39-202ENST00000409025 EPN3Q9H201 632 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 TMEM51Q9NW97 253 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 EURLQ9NYK6 297 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 SFMBT1Q9UHJ3 866 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 CHMP2BQ9UQN3 213 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 SNX10Q9Y5X0 201 aa19.55■□□□□ 0.72
USP39-202ENST00000409025 RNF103O00237 685 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 OPHN1O60890 802 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 LRIG2O94898 1065 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 CHN1P15882 459 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 EPHB2P29323 1055 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 CCR1P32246 355 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 SERPINB6P35237 376 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 PGFP49763 221 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 GPR17Q13304 367 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 MTM1Q13496 603 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 SEMA5AQ13591 1074 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 C1orf53Q5VUE5 145 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 ANKS3Q6ZW76 656 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 NETO2Q8NC67 525 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 MDM1Q8TC05 714 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 SPPL2BQ8TCT7 592 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 BCAS4Q8TDM0 211 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 CENPTQ96BT3 561 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 HAPLN3Q96S86 360 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 SLC24A2Q9UI40 661 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 RABGEF1Q9UJ41 708 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 TEX264Q9Y6I9 313 aa19.54■□□□□ 0.72
USP39-202ENST00000409025 GCAP28676 217 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 PBX3P40426 434 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 NR1H3Q13133 447 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 IKBKEQ14164 716 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 TMED2Q15363 201 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 RTP2Q5QGT7 225 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 TADA2BQ86TJ2 420 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 CYP4X1Q8N118 509 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 SERPINB11Q96P15 392 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 BRD8Q9H0E9 1235 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 SEPT10Q9P0V9 454 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 FETUBQ9UGM5 382 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 NR2E3Q9Y5X4 410 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 PLXNA3P51805 1871 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 MTMR11A4FU01 709 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 TBC1D4O60343 1298 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 UPP2O95045 317 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 MX2P20592 715 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 PPP2R5DQ14738 602 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 KLHL38Q2WGJ6 581 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 CNKSR3Q6P9H4 555 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms