RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 GOT1P17174 413 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 AMPD1P23109 780 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 ATP5C1P36542 298 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 BMPR1AP36894 532 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 ATXN1P54253 815 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 PITX1P78337 314 aaPredicted RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 DHX9Q08211 1270 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 GPS1Q13098 491 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 TAF12Q16514 161 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 RASIP1Q5U651 963 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 NCBP2-AS2Q69YL0 99 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 HEATR6Q6AI08 1181 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 LRRC31Q6UY01 552 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 PPIL6Q8IXY8 311 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 TFB1MQ8WVM0 346 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 CASP10Q92851 521 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 B3GALT6Q96L58 329 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 OLFM3Q96PB7 478 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 PPP1R2P1Q96PQ5 205 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 VAT1Q99536 393 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 TMEM121Q9BTD3 319 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 ZBP1Q9H171 429 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 PABPC3Q9H361 631 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 TRPM5Q9NZQ8 1165 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 GMIPQ9P107 970 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 PPARGC1AQ9UBK2 798 aaKnown RBP10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 HEY1Q9Y5J3 304 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
SNORD88C-201ENST00000408061 SYNJ2BP-COX16A0A087WUM0 186 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 C5orf67F2Z3F1 127 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 PRRG1O14668 218 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 CHADO15335 359 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 CREB3O43889 395 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TLL1O43897 1013 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 LPXNO60711 386 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 SASH3O75995 380 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 FGF19O95750 216 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 IGLV3-27P01718 113 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 NUDT17P0C025 328 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 FAM153BP0C7A2 387 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 PECAM1P16284 738 aaPredicted RBP10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TSHRP16473 764 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 ATP2A2P16615 1042 aaKnown RBP10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 ERCC2P18074 760 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 ATF6P18850 670 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 MAGEA6P43360 314 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 RABGGTBP53611 331 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 ITGA8P53708 1063 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 PMS2P54278 862 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 IFRD2Q12894 506 aaPredicted RBP10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TRADDQ15628 312 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 FAM153CQ494X1 144 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 IZUMO3Q5VZ72 239 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 C1orf228Q6PIY5 440 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 ZCCHC9Q8N567 271 aaKnown RBP10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 FATE1Q969F0 183 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TBC1D31Q96DN5 1066 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TTC25Q96NG3 672 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TSGA13Q96PP4 275 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 QKIQ96PU8 341 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TMEM109Q9BVC6 243 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 KLC2Q9H0B6 622 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 CRISPLD1Q9H336 500 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 DTLQ9NZJ0 730 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 MARCH2Q9P0N8 246 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 COX16Q9P0S2 106 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 DPP7Q9UHL4 492 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 TRHDEQ9UKU6 1024 aa10.65□□□□□ -0.7
SNORD88C-201ENST00000408061 KIAA1671Q9BY89 1806 aa10.65□□□□□ -0.71
SNORD88C-201ENST00000408061 ZNF840PA6NDX5 716 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 GOLGA6L10A6NI86 522 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 GOLGA8KD6RF30 607 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 C2CD2LO14523 706 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 KCNN4O15554 427 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 ADAM12O43184 909 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 TLR5O60602 858 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 OPHN1O60890 802 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 PAGE1O75459 146 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 LRIG2O94898 1065 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 CXCL14O95715 111 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 LATS1O95835 1130 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 IFNB1P01574 187 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 LINC00271P0C7V0 271 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 HMGA1P17096 107 aaKnown RBP10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 EPHB2P29323 1055 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 RPL22P35268 128 aaKnown RBP10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 HSD17B3P37058 310 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 FDFT1P37268 417 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 GPR15P49685 360 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 USP46P62068 366 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 SARNPP82979 210 aaKnown RBP10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
SNORD88C-201ENST00000408061 RNASEH2BQ5TBB1 312 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms