RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZSCAN18Q8TBC5 510 aaPredicted RBP10.15□□□□□ -0.78
MSH2-202ENST00000406134 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 MTBPQ96DY7 904 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 DHX35Q9H5Z1 703 aaKnown RBP10.15□□□□□ -0.78
MSH2-202ENST00000406134 GOLGA2P5Q9HBQ8 144 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 MIA3Q5JRA6 1907 aa10.15□□□□□ -0.78
MSH2-202ENST00000406134 A0A088AWK7 358 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 DPPA5A6NC42 116 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 FAM72CH0Y354 149 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 TPP1O14773 563 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 MAGEC1O60732 1142 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 KRT37O76014 449 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 MMP3P08254 477 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 ALOX15P16050 662 aaPredicted RBP10.15□□□□□ -0.79
MSH2-202ENST00000406134 TMEM62Q0P6H9 643 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 UBXN11Q5T124 520 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 STXBP5Q5T5C0 1151 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 FAM72AQ5TYM5 149 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 FAM72DQ6L9T8 149 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 PACS1Q6VY07 963 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 FAM72BQ86X60 149 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 MYLK4Q86YV6 388 aaPredicted RBP10.15□□□□□ -0.79
MSH2-202ENST00000406134 ZDHHC17Q8IUH5 632 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 CDKL3Q8IVW4 592 aaPredicted RBP10.15□□□□□ -0.79
MSH2-202ENST00000406134 LRRC52Q8N7C0 313 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 ANKRD52Q8NB46 1076 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.15□□□□□ -0.79
MSH2-202ENST00000406134 CDCA5Q96FF9 252 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 RNF39Q9H2S5 420 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 STX18Q9P2W9 335 aaKnown RBP10.15□□□□□ -0.79
MSH2-202ENST00000406134 MORF4L1Q9UBU8 362 aa10.15□□□□□ -0.79
MSH2-202ENST00000406134 A0A0A0MRY4 1105 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 H3BRB1 525 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 GYG2O15488 501 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 KITP10721 976 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 NR2C2P49116 596 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 RABGGTBP53611 331 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 BTKQ06187 659 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 PPM1JQ5JR12 505 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 LRRC8BQ6P9F7 803 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 BHLHA9Q7RTU4 235 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 VPS52Q8N1B4 723 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 SHCBP1Q8NEM2 672 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ACVR1CQ8NER5 493 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 HTR3CQ8WXA8 447 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 APBB2Q92870 758 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 SPATA13Q96N96 652 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 TUT1Q9H6E5 874 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 PLEKHA5Q9HAU0 1116 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 XPNPEP3Q9NQH7 507 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ADARB2Q9NS39 739 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 SYBUQ9NX95 663 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 SLC7A8Q9UHI5 535 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 H3BRJ5 948 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 DCLK1O15075 740 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 BUD23O43709 281 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 KIF1CO43896 1103 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 PROCP04070 461 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 LCP1P13796 627 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 AOC1P19801 751 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ADAM17P78536 824 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 BST2Q10589 180 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 SEMA3BQ13214 749 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ITGA7Q13683 1181 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 KYAT1Q16773 422 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 OR52E8Q6IFG1 317 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 HFE2Q6ZVN8 426 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 UNC93AQ86WB7 457 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ZNF419Q96HQ0 510 aaPredicted RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 EIF2B3Q9NR50 452 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 ZNF358Q9NW07 568 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 PLIN3O60664 434 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ENO1P06733 434 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 MGAT1P26572 445 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 GLUD2P49448 558 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 TMPRSS15P98073 1019 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 SNX30Q5VWJ9 437 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 LRRC74BQ6ZQY2 392 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ANKRD13AQ8IZ07 590 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 ZNF567Q8N184 647 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 PLD6Q8N2A8 252 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
MSH2-202ENST00000406134 FBXO41Q8TF61 875 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 P2RY11Q96G91 374 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 OSBPL1AQ9BXW6 950 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 GDAP2Q9NXN4 497 aa10.14□□□□□ -0.79
MSH2-202ENST00000406134 TDRD15B5MCY1 1934 aaKnown RBP10.13□□□□□ -0.79
MSH2-202ENST00000406134 MEI4A8MW99 385 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 TM7SF2O76062 418 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 RECQL4O94761 1208 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 SERPINA6P08185 405 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 MLNP12872 115 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 AKAP5P24588 427 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 ADORA2BP29275 332 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 NDUFV1P49821 464 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 CCNHP51946 323 aaPredicted RBP10.13□□□□□ -0.79
MSH2-202ENST00000406134 GRIK3Q13003 919 aa10.13□□□□□ -0.79
MSH2-202ENST00000406134 SEPT7Q16181 437 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms