RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 RLN3Q8WXF3 142 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 RNF34Q969K3 372 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 ASNSD1Q9NWL6 643 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 KIAA1549LQ6ZVL6 1849 aa18.86■□□□□ 0.61
PTPRN2-204ENST00000404321 GOLGA8SH3BPF8 625 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 DAB1O75553 588 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 LSM8O95777 96 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 GLI1P08151 1106 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 CHRNB2P17787 502 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 HLA-FP30511 346 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 ZNF445P59923 1031 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 RPS24P62847 133 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 NOMO3P69849 1222 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 SPEM2Q0P670 501 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 NNTQ13423 1086 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 RAP1GAP2Q684P5 730 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 TMEM215Q68D42 235 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC26A9Q7LBE3 791 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 PHLDB2Q86SQ0 1253 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 CFAP52Q8N1V2 620 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 WFDC5Q8TCV5 224 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 C18orf8Q96DM3 657 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC2A11Q9BYW1 496 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 ABCB8Q9NUT2 735 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 CFAP54Q96N23 3096 aa18.85■□□□□ 0.61
PTPRN2-204ENST00000404321 A0A1W2PQF6 199 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 TFE3P19532 575 aaPredicted RBP18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 FMO1Q01740 532 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 CDR2Q01850 454 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 USP39Q53GS9 565 aaKnown RBP18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 FAM102AQ5T9C2 384 aaPredicted RBP18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 CHSY1Q86X52 802 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 XYLT1Q86Y38 959 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 LGI2Q8N0V4 545 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 FRMD1Q8N878 549 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 AZIN2Q96A70 460 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC6A17Q9H1V8 727 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 PARD6AQ9NPB6 346 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 ELOVL2Q9NXB9 296 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 USP18Q9UMW8 372 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 STON1Q9Y6Q2 735 aa18.84■□□□□ 0.61
PTPRN2-204ENST00000404321 FRYLO94915 3013 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 M0QYT0 321 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 RETP07949 1114 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 GABRG2P18507 467 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 TACR2P21452 398 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 BCKDHBP21953 392 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 CD70P32970 193 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 IL12RB1P42701 662 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 IQCB1Q15051 598 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 CCDC6Q16204 474 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 PLK5Q496M5 336 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 MS4A13Q5J8X5 152 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 MMS22LQ6ZRQ5 1243 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 ZDHHC17Q8IUH5 632 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 CARNMT1Q8N4J0 409 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 HJURPQ8NCD3 748 aaPredicted RBP18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 SLC30A5Q8TAD4 765 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 CYB5D2Q8WUJ1 264 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 UCMAQ8WVF2 138 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 BTN2A3PQ96KV6 586 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 GABRG3Q99928 467 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 DDX50Q9BQ39 737 aaKnown RBP18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 CBX8Q9HC52 389 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 CALCOCO1Q9P1Z2 691 aa18.83■□□□□ 0.61
PTPRN2-204ENST00000404321 PABPC1P11940 636 aaKnown RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 GGCXP38435 758 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 MATKP42679 507 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 GABRB2P47870 512 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 EIF4EBP2Q13542 120 aaPredicted RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 ZNF234Q14588 700 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 OTUD1Q5VV17 481 aaPredicted RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 CHST9Q7L1S5 443 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 ZNF677Q86XU0 584 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 MFN1Q8IWA4 741 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 ATP6V0D2Q8N8Y2 350 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 ZNF397Q8NF99 534 aaPredicted RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 PCDHB18PQ96TA0 734 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 ADAM33Q9BZ11 813 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 SEPT11Q9NVA2 429 aaKnown RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.82■□□□□ 0.61e-6■■■■□ 22.4
PTPRN2-204ENST00000404321 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.82■□□□□ 0.68e-7■■■■□ 25.2
PTPRN2-204ENST00000404321 THAP10Q9P2Z0 257 aaPredicted RBP18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 GGA2Q9UJY4 613 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 DAAM1Q9Y4D1 1078 aa18.82■□□□□ 0.6
PTPRN2-204ENST00000404321 TYW5A2RUC4 315 aaKnown RBP18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 KCNU1A8MYU2 1149 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 CYP1A1P04798 512 aaPredicted RBP18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 ABCB4P21439 1286 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 CCR1P32246 355 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 NOS2P35228 1153 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 NUMBP49757 651 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 SULT1E1P49888 294 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 EIF4HQ15056 248 aaKnown RBP18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 FILIP1LQ4L180 1135 aa18.81■□□□□ 0.6
PTPRN2-204ENST00000404321 MPP7Q5T2T1 576 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms