RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 RUNDC3BQ96NL0 473 aa26.08■■□□□ 1.77
HIST2H3A-201ENST00000403683 EPC1Q9H2F5 836 aa26.08■■□□□ 1.77
HIST2H3A-201ENST00000403683 ZNF576Q9H609 170 aa26.08■■□□□ 1.77
HIST2H3A-201ENST00000403683 LRRC19Q9H756 370 aa26.08■■□□□ 1.77
HIST2H3A-201ENST00000403683 SMPD4Q9NXE4 827 aa26.08■■□□□ 1.77
HIST2H3A-201ENST00000403683 XPO7Q9UIA9 1087 aaKnown RBP26.08■■□□□ 1.77
HIST2H3A-201ENST00000403683 APOC4-APOC2K7ER74 178 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 APOC2P02655 101 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 EPHB2P29323 1055 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 KCNJ1P48048 391 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 KCNQ1P51787 676 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 SLC7A5Q01650 507 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 GLE1Q53GS7 698 aaKnown RBP26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 PQLC3Q8N755 202 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 CDCA3Q99618 268 aaPredicted RBP26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 PRKD2Q9BZL6 878 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 GKN1Q9NS71 199 aa26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 DNMT3BQ9UBC3 853 aaKnown RBP26.07■■□□□ 1.76
HIST2H3A-201ENST00000403683 RAD51CO43502 376 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 LRIG2O94898 1065 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 CKMP06732 381 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 RHOP08100 348 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 DR1Q01658 176 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 OTUD4Q01804 1114 aaKnown RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 NPNTQ6UXI9 565 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 PLD5Q8N7P1 536 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 C12orf50Q8NA57 414 aaPredicted RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 ACTL9Q8TC94 416 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 ARHGEF4Q9NR80 690 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 ZNF148Q9UQR1 794 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 HS3ST4Q9Y661 456 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 TGM2P21980 687 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 FNTAP49354 379 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 MTA1Q13330 715 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 SLC9A4Q6AI14 798 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 LRRC31Q6UY01 552 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 GRASPQ7Z6J2 395 aaPredicted RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 GPR161Q8N6U8 529 aaKnown RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 C12orf76Q8N812 135 aaPredicted RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 PLD4Q96BZ4 506 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 HINFPQ9BQA5 517 aa26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 FEZ2Q9UHY8 353 aaPredicted RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 MTCL1Q9Y4B5 1905 aaKnown RBP26.06■■□□□ 1.76
HIST2H3A-201ENST00000403683 TRAV19A0A0A6YYK7 116 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 IGLV3-27P01718 113 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 HCAR3P49019 387 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 MLLT6P55198 1093 aaPredicted RBP26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 SEMA3BQ13214 749 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 BYSLQ13895 437 aaKnown RBP26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 ARHGAP15Q53QZ3 475 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 TTC27Q6P3X3 843 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 GSTA5Q7RTV2 222 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 LEMD2Q8NC56 503 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 C1orf74Q96LT6 269 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 SLC22A12Q96S37 553 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 FRMD8P1Q9BZ68 369 aaPredicted RBP26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 PRDM16Q9HAZ2 1276 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 DNPEPQ9ULA0 475 aa26.05■■□□□ 1.76
HIST2H3A-201ENST00000403683 MCF2LO15068 1137 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 TTI1O43156 1089 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 LIASO43766 372 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 PECAM1P16284 738 aaPredicted RBP26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 SLC11A2P49281 568 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 EIF3EP60228 445 aaKnown RBP26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 DHX34Q14147 1143 aaKnown RBP26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 TMC5Q6UXY8 1006 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 ATL2Q8NHH9 583 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 GRK7Q8WTQ7 553 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 SMG7Q92540 1137 aaKnown RBP26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 KLF16Q9BXK1 252 aaPredicted RBP26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 PRO3102Q9H379 93 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 NSUN3Q9H649 340 aaKnown RBP26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 VANGL2Q9ULK5 521 aa26.04■■□□□ 1.76
HIST2H3A-201ENST00000403683 ERCC2P18074 760 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 MLLT1Q03111 559 aaPredicted RBP26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 DPYSQ14117 519 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 MS4A13Q5J8X5 152 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 GPR158Q5T848 1215 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 PIK3R6Q5UE93 754 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 RAP1GAP2Q684P5 730 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 TMCO3Q6UWJ1 677 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 DENND1CQ8IV53 801 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 TBC1D31Q96DN5 1066 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 TCEAL4Q96EI5 215 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 ETNK2Q9NVF9 386 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 PCYOX1Q9UHG3 505 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 CPQQ9Y646 472 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 E9PAM4 449 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 H7C0C1 242 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 STC2O76061 302 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 HEXIM1O94992 359 aaKnown RBP26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 MAP3K6O95382 1288 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 ECEL1O95672 775 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 CORO1AP31146 461 aaKnown RBP26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 CCR2P41597 374 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 ATP5OP48047 213 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 NTHL1P78549 312 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 LMNB2Q03252 620 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 PPP1R7Q15435 360 aa26.03■■□□□ 1.76
HIST2H3A-201ENST00000403683 STXBP5Q5T5C0 1151 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms