RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 GYPCP04921 128 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 CALB1P05937 261 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 TFE3P19532 575 aaPredicted RBP19.92■□□□□ 0.78
RTN4-207ENST00000402434 CXCR3P49682 368 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 SGSHP51688 502 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 NRLP54845 237 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 SEC13P55735 322 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 KLHL30Q0D2K2 578 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 NME3Q13232 169 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 MTA1Q13330 715 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 MS4A13Q5J8X5 152 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 C10orf76Q5T2E6 689 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 ATP6V0D2Q8N8Y2 350 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 PIGVQ9NUD9 493 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 ZSCAN32Q9NX65 697 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 SLC12A6Q9UHW9 1150 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 HCN2Q9UL51 889 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 LUC7L2Q9Y383 392 aaKnown RBP19.92■□□□□ 0.78
RTN4-207ENST00000402434 PCDHGA2Q9Y5H1 932 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 PIEZO1Q92508 2521 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 SYNJ2BP-COX16A0A087WUM0 186 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 PROB1E7EW31 1015 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 MOCS2O96007 188 aaPredicted RBP19.91■□□□□ 0.78
RTN4-207ENST00000402434 ABCB4P21439 1286 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 HGSNATQ68CP4 663 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 PPP1R2P3Q6NXS1 205 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 MCOLN2Q8IZK6 566 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 IL17RCQ8NAC3 791 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 C3orf20Q8ND61 904 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 FAM122AQ96E09 287 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 MYEOVQ96EZ4 313 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 VCPIP1Q96JH7 1222 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 PRICKLE1Q96MT3 831 aaPredicted RBP19.91■□□□□ 0.78
RTN4-207ENST00000402434 TBCBQ99426 244 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 METTL5Q9NRN9 209 aaKnown RBP19.91■□□□□ 0.78
RTN4-207ENST00000402434 COX16Q9P0S2 106 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 MMP17Q9ULZ9 603 aa19.91■□□□□ 0.78
RTN4-207ENST00000402434 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.91■□□□□ 0.788e-8■□□□□ 10.6
RTN4-207ENST00000402434 BZW2Q9Y6E2 419 aaKnown RBP19.91■□□□□ 0.78
RTN4-207ENST00000402434 TCRBV5S1A1TA0A578 114 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 GZMAP12544 262 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 TIE1P35590 1138 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 SULT1E1P49888 294 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 DMC1Q14565 340 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 ZC3H14Q6PJT7 736 aaKnown RBP19.9■□□□□ 0.78
RTN4-207ENST00000402434 CAMKK1Q8N5S9 505 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 ALLCQ8N6M5 410 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 EMC1Q8N766 993 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 HJURPQ8NCD3 748 aaPredicted RBP19.9■□□□□ 0.78
RTN4-207ENST00000402434 CPLX3Q8WVH0 158 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 RNF34Q969K3 372 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 PHOX2BQ99453 314 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 PRMT1Q99873 361 aaKnown RBP19.9■□□□□ 0.78
RTN4-207ENST00000402434 POLR3BQ9NW08 1133 aaPredicted RBP19.9■□□□□ 0.78
RTN4-207ENST00000402434 TAS2R14Q9NYV8 317 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 SLC8A2Q9UPR5 921 aa19.9■□□□□ 0.78
RTN4-207ENST00000402434 VPS13AQ96RL7 3174 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 C2CD4BA6NLJ0 364 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 SIGLEC16A6NMB1 481 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 DDX3XO00571 662 aaKnown RBP eCLIP19.89■□□□□ 0.77
RTN4-207ENST00000402434 ENDOD1O94919 500 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 KRT3P12035 628 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 SKILP12757 684 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 GEN1Q17RS7 908 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 BRMS1LQ5PSV4 323 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 SPECC1LQ69YQ0 1117 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 PHLDB2Q86SQ0 1253 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 ZNF513Q8N8E2 541 aaPredicted RBP19.89■□□□□ 0.77
RTN4-207ENST00000402434 JOSD2Q8TAC2 188 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 CFAP57Q96MR6 1250 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 WDCPQ9H6R7 721 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 ARHGEF38Q9NXL2 777 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 PAXBP1Q9Y5B6 917 aa19.89■□□□□ 0.77
RTN4-207ENST00000402434 CCDC163A0A0D9SF12 145 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 TBL1XO60907 577 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 LILRB5O75023 590 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 KLF8O95600 359 aaPredicted RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 HNRNPLP14866 589 aaKnown RBP eCLIP19.88■□□□□ 0.775e-9■■■□□ 16.4
RTN4-207ENST00000402434 TACR2P21452 398 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 HLA-FP30511 346 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 HOXC13P31276 330 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 HNRNPH3P31942 346 aaKnown RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 CASP14P31944 242 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 RFC1P35251 1148 aaPredicted RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 RPS24P62847 133 aaKnown RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 DEUP1Q05D60 604 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 RAP1GAP2Q684P5 730 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 SND1Q7KZF4 910 aaKnown RBP eCLIP19.88■□□□□ 0.773e-12■■■■□ 21.6
RTN4-207ENST00000402434 TRMT11Q7Z4G4 463 aaKnown RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 ANKS1BQ7Z6G8 1248 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 KIAA0907Q7Z7F0 614 aaPredicted RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 CCDC33Q8N5R6 958 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.88■□□□□ 0.77
RTN4-207ENST00000402434 ZNF557Q8N988 423 aaPredicted RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 TXNDC5Q8NBS9 432 aaKnown RBP19.88■□□□□ 0.77
RTN4-207ENST00000402434 RXFP2Q8WXD0 754 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 ATRIPQ8WXE1 791 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 SEMA4AQ9H3S1 761 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 R4GN57 208 aa19.88■□□□□ 0.77
RTN4-207ENST00000402434 TYW5A2RUC4 315 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms