RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ARHGEF38Q9NXL2 777 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 IL37Q9NZH6 218 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 TMEM120BA0PK00 339 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 PPP1R12AO14974 1030 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-203ENST00000401617 IRAK2O43187 625 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 OPHN1O60890 802 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 GEMIN4P57678 1058 aaKnown RBP12.65□□□□□ -0.38
CLIP4-203ENST00000401617 TPI1P60174 286 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 CDK16Q00536 496 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 MPP2Q14168 576 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 BRMS1LQ5PSV4 323 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 ARTNQ5T4W7 220 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 FAXCQ5TGI0 409 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 PDZD4Q76G19 769 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-203ENST00000401617 PALM2Q8IXS6 379 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 CCDC33Q8N5R6 958 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 FBF1Q8TES7 1133 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 ZNF473Q8WTR7 871 aaKnown RBP12.65□□□□□ -0.38
CLIP4-203ENST00000401617 P2RY11Q96G91 374 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 SMOC2Q9H3U7 446 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 OR12D3Q9UGF7 316 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 TBK1Q9UHD2 729 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 CHMP2BQ9UQN3 213 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 SCML2Q9UQR0 700 aa12.65□□□□□ -0.38
CLIP4-203ENST00000401617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
CLIP4-203ENST00000401617 OR6C75A6NL08 312 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 POC1B-GALNT4F8VUJ3 575 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 NCAM2O15394 837 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 AVILO75366 819 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 C1QAP02745 245 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 APRTP07741 180 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 BRAFP15056 766 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
CLIP4-203ENST00000401617 PGFP49763 221 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 HTRA3P83110 453 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 PPARDQ03181 441 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 TMED2Q15363 201 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 KLHL38Q2WGJ6 581 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 ARHGEF18Q6ZSZ5 1173 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 ABI1Q8IZP0 508 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 HAPLN3Q96S86 360 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 GPR62Q9BZJ7 368 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 RABEP2Q9H5N1 569 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 PLAC1Q9HBJ0 212 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
CLIP4-203ENST00000401617 TMEM51Q9NW97 253 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 PSMC3IPQ9P2W1 217 aaPredicted RBP12.64□□□□□ -0.39
CLIP4-203ENST00000401617 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 TRIM66O15016 1216 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 HOXA2O43364 376 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 ALDH2P05091 517 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 CCT5P48643 541 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 SLC11A1P49279 550 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 GATMP50440 423 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 SLC18A1P54219 525 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 MTFR1Q15390 333 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 BTBD8Q5XKL5 378 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 CAPN12Q6ZSI9 719 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 NPAS4Q8IUM7 802 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 TP53INP2Q8IXH6 220 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 SIGLEC10Q96LC7 697 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 DEFB118Q96PH6 123 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 EPAS1Q99814 870 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 TMEM175Q9BSA9 504 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 NMUR1Q9HB89 426 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
CLIP4-203ENST00000401617 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
CLIP4-203ENST00000401617 SENP1Q9P0U3 644 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 NEU3Q9UQ49 428 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 NR2E3Q9Y5X4 410 aa12.64□□□□□ -0.39
CLIP4-203ENST00000401617 FAM92AA1XBS5 289 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 RASA4BC9J798 803 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 RNF103O00237 685 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 RASA4O43374 803 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 LRIG2O94898 1065 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PARNO95453 639 aaKnown RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 GSTA2P09210 222 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MLNP12872 115 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 DRD4P21917 467 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 HOXC13P31276 330 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 HTR7P34969 479 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PPIDQ08752 370 aaKnown RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 AP1B1Q10567 949 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PPP2R5DQ14738 602 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MANEALQ5VSG8 457 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MSANTD2Q6P1R3 559 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 SRRM1Q8IYB3 904 aaKnown RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms